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13-1941-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3208332 [Map]; Strand: w
      • AT3G10350.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G10350.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-1941-1 - 5-prime edge 
    CACCGCTTCT TTGTATAGCA CAGAAGTGAA GAGCAAGCAG ACGAAAAAAA 
    TGGCGACTCT GTCTTCCTAT CTGTTATCTT CTCCTCCTCT ATGCAAATCC 
    CGATTCTCGG CAACAAGTCT CGTCTCAGGA ATTGATTTCA TCTCTTTCTC 
    TCCTCGAACA ACTCTCTCCT CGTCATCCAC TGTCTTGCCG GCGATTCTTT 
    CTCTTTCCGT TAAACATAAT CGCCGGAGAA ACTCGCTTCA AGGTTCGAAT 
    T

AT3G10350.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1); Has 2945 Blast hits to 2509 proteins in 789 species: Archae - 176; Bacteria - 2046; Metazoa - 144; Fungi - 222; Plants - 103; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10350.2

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1).
Link
InterPro Scan - TAIR