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13-1952-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7948589 [Map]; Strand: c
      • AT4G13670.1 - [+] show detail - plastid transcriptionally active 5
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-1952-1 - 3-prime edge 
    TGANAANTGA ATTGTNAANT AAAAAGGAAN AGTATTTACC NACCGTTACC 
    GACCGTTTTN ANNCCTAACT AACAAAAGCT TCGATTATTT TATCGGNTCT 
    CTGACTNATG GCTTCTTCTT CTCTACCTCT TTCTCTTCCN TGTTCCACTC 
    CGATCTTGTG GTNGGACGTA GGGGGGCAAA AAACTTNNCN GATGNNGTCC 
    TCTNTGGTGG GNCTGNGCNT TCGTGGGTNG TGNGCTGCNN NTNTGNTGNC 
    CNCGGGCNGC NGGGAGGGGN GNNGGATAAA NCNCCCAGNG AAAGANATTT 
    TTTTTTTTAN GGGGAGCGNG GNGCGGNNNN CGCGCGCCCN AGCGGCGCGG 
    GGGGGGGNGC GCGGGCGNAN CNCGCGCGNC CGGCAATATT GCGGGCNNAA 
    AAAAACGNGG GGNANCGTGT GCCTNTNTNN TTNTTTNGGT GGGTCGTNNG 
    GGGGCGGNAC GGGGNNNGNN GGAGGAAGGG NGGGGGGGTG GGGGGCGGNT 
    GCGGGGAAGN GGGGGTGAGN GTGNNGGNCN NTTGNNCGTG CTGGGGGCTN 
    GGGNGNTNGN TTNTGGTGNG CGCNCCGGCA TCTTNCTCNT TGCNCTTTCN 
    CGNACACGNN GNTTATTNNT GGATTAANCA TNATAATTAT NTTTCTTCGN 
    GTTTNTANTC GGNATCCACG CGGANGCTTA TCNTTCAACN NCCTCANCGC 
    CNCTNTGCCC CCACCANNGN NNNGCGNNNC NNNNCCGGNC AGTGGANNGN 
    GAATCGNTCG GNGGTGTGGN GTGGCGNGTN GGANGGANAG CGGGCGGCGG 
    GAAGGGCGCC GTGTGGNGNC GNGGGNGCTA NNGAGNTAGG TNGATNGGNC 
    NGGTNGNGAA GGTNGNGGAN CGCCGTGGNG CAGCGCTANN GNAAGNNTAA 
    AGAAGAAAAA ANAAN

AT4G13670.1

Model type
Protein coding
Short Description
plastid transcriptionally active 5
Computational Description
plastid transcriptionally active 5 (PTAC5); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, metabolic process; LOCATED IN: plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan binding-like (InterPro:IPR002477), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 835 Blast hits to 827 proteins in 285 species: Archae - 9; Bacteria - 385; Metazoa - 155; Fungi - 28; Plants - 81; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink).
Link
InterPro Scan - TAIR