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13-1957-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2632699 [Map]; Strand: w
      • AT3G08660.1 - [+] show detail - Phototropic-responsive NPH3 family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 13-1957-1 - 3-prime edge
    ACGTGGTTGC TTGCTTCTTG TGAAAGTTTC TTGCAGTCAA TGAAGTTGCA 
    TAGCTTCTTG CGTTCTTCGT CTGTCAATAA TGGATGAGCC TAATTTCCAT
    ATTTGATTAT CAGTTTCAGA TGTTTTCAAA ACATAAAAAG ACTTTGTTCA
    ATTGTGTTTT TGTTTACCTT GAGATACATA TCAATGGCTC TGTAGATCCC
    ATCGTCAACG ATACGTGAGT GTTCGGGTAG TGTCTCTATA ATAGCCGTAA
    ACTTGTGTAG ACTCAGGTAT GGATC

AT3G08660.1

Model type
Protein coding
Short Description
Phototropic-responsive NPH3 family protein
Computational Description
Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G08570.1); Has 956 Blast hits to 919 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 68; Fungi - 0; Plants - 886; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR