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Mutant Lines
13-1983-1

13-1983-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 8531782 [Map]; Strand: w
- AT3G23690.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: -770; Region: promoter
- AT3G23700.1 - [+] show detail - Nucleic acid-binding proteins superfamily
  Distance: 0; Region: intron8 (CDS)

TTTATATGGC CATAGATAGA GAGATTCTTG GTTTGATTTT AAGTAAAATA 
TTAACATTAC AGGTGCAAGA GATACACTTG ACAACGTCTC TGGAACAAGG 
AGGAATCAAG AAAGCGCTTC AGCATGTACT AGAACGCGTC CCCTAAGAAC 
CCGAAAAAAG ACTTTTGATA CTCAGCCACT ATATTCAGCT CTATGCATCT 
CAAACTCTTG CCAATGTAAC TTCAAGTGGA GCAGAGACTA CTTCAGAAAT 
ATTCTTAAAA GGCAAAAATG CAAATTCATT TGTATCATCA TTATATGTCA 
CACATAACAC AAACCTATGA AAATATATGT GTATACTCAA TGTTTTTAGT 
TACACATTAT AAACTTCATT AACATAAACA ACTCATAATA CATCAAATTC 
AAGTCTAAAA CCTTCTCAAG TCAATAATTG ACTTTTTTGA CACCATGTTT 
TGGTAAGTAC CATCTTTTAA AATAGTCTCT TAACCAAGAA TAATCAAACA 
TGATAATTAA AAACAATTTT ATCCTTTTGT TTGTTTTCTC TCCCACAACT 
TTCCTGTCTC TGCCATGCAC ATGCTCTCTC TCTCTCTCTC TTTCTTCTCT 
CTTATTCTCA CTCCANTGAT TACAGAGGCC CAGCCNTAAG CAGCCCTACC 
CACTTTCACC ATCTAGTGGT NCCCACATTA ACATAAAACA CACGGTNAGA 
TTCTTNTCCT TTTNGAACTG NAAAATCACT CTTTNTAATN CTAATCTTTN 
TANCATTACT TTNTTTTTTA TT

AT3G23690.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2369 Blast hits to 2358 proteins in 154 species: Archae - 0; Bacteria - 6; Metazoa - 35; Fungi - 85; Plants - 2234; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G23700.1

Model type: Protein coding
Short Description: Nucleic acid-binding proteins superfamily
Computational Description: Nucleic acid-binding proteins superfamily; FUNCTIONS IN: RNA binding; INVOLVED IN: response to cold; LOCATED IN: chloroplast stroma, nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: ribosomal protein S1 (TAIR:AT5G30510.1); Has 30347 Blast hits to 20342 proteins in 2814 species: Archae - 227; Bacteria - 22388; Metazoa - 193; Fungi - 227; Plants - 347; Viruses - 0; Other Eukaryotes - 6965 (source: NCBI BLink).
Link: InterPro Scan - TAIR