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13-1987-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26527236 [Map]; Strand: w
      • AT1G70380.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-1987-1 - 3-prime edge 
    TTTAAAACAG GANAGAGGTA TTTTACTTNA CCGTTACCGA CCGTTTTCAT 
    GGCNTCTTTA ATACGTGGGG AAGACTTCAG AAGTGCTTAC TTGCTCCGAT 
    CAATGACAAG GCCTCNACTG TTGTTCGTCG CTAGTCGTAG CCGCAAATTC 
    ACACGCTGAA ACCTGCTTTC ACTCTGTTTA TCAAGAACCA CCATTGTTGT 
    TGTCTGGTAA ACGGCAGATG CTTACCGATA ATCACATAGC ACCAGTTTTC 
    ACGGTTTCTA ATCCCATTCT TGGTTTGCTC TGTCATCAAG GATATAATAA 
    TGAGATTGTG ATTTGCAATC CCGGTCTGAA AAAGTTTCGG AATTTACCGC 
    AAATCCAAGT GCCTGAAGGA GCATCCGTGA GAAGTTTTTT CGGATACGAT 
    AAAGTTGACA AAGTATTCAA GGTGTTATGT GTATGTGTAC CACAGACACA 
    GTTCGGAGCT GGTTGGACAT CAAAAGAACC TAAGAAATAT CAGGTCTACA 
    CGGTGAGATC GGATCATGAA AAACCTTCCT TTTGGAGACC GATCATTTGT 
    AATGATGATC ATTCAGTACT NACTGATGAA GGACTATTTA NTGGAGGTTN 
    NCTTGTACTA TGGAGCTCGG GTCGAGTTGC AACAAAACCT ATGGNAATTG 
    ANGGTNAACC GTGAGTNCTG AAGCGTNTGN GGNNANTTAA ACTGCCTGAA 
    GGAGTTCGCT CTTGCTATTN ACTGGAGATN GGCGNNCTCN ATAGGGAAAG 
    TTNNCTTTNN TNAACCCCTT TGNNCTTAAA NNTAANTTCN ANGGANTTCT 
    TNAAANANTG GGNNANANCA AAGTTTATN

AT1G70380.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT1G70960.1); Has 1387 Blast hits to 1338 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1387; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR