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13-1997-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 60312 [Map]; Strand: c
      • AT1G01120.1 - [+] show detail - 3-ketoacyl-CoA synthase 1
        Distance: -1145; Region: intergenic
      • AT1G01130.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: CBL-interacting protein kinase (InterPro:IPR02066...
        Distance: 1593; Region: intergenic
    Flanking Genome Sequence: 13-1997-1 - 5-prime edge 
    ATTAGAAATG ATTTAACTAT TAAAAGCATT ACATTTTACC AACAACTTTA 
    TCCCAATGAA AACAAAACAG GGACAATAAN GTCCACTTTG GGACCTCAAA 
    TCCGAACATT TTATTTACCT ACAAAGCTAC AAGCTACAAC TACCCGTCCG 
    AGGTCTATTT TGGACACCTT GGCACAATCA ATATGAAATA ACTAGAAAAA 
    TACTCGAAAA CTAACTAGAT ATGCAACTCC AAAACTAATT ACTTCTTTAT 
    CAGGATTTAT AATATGAAAT AAATTCATTA TGTAAAGGGT CCCTTATATA 
    ACAAACGTCT TAACGAAGAC AGCAAATTNA TAAATGACAA TGACTNCAAT 
    ACTGGAACAG NTAATANGGA TGGNATNTAA NGGAGAAACA AATCGAAATG 
    TGCTGCTNTN AAGAAGCCCA TAGNAATTCA TTATCCNTNA GTTTANCATG 
    GCCCATTATT AANGAGTTCG NNTGCATGTG GGANACACCN TTNATACANN 
    GANNTGACNG ANCCNGAATA TTNGGGGANA NNCCTNNCNG NCNGCCGNTC 
    GANNTNGNAN TNNTGGNCAN GTNAANGGNT TNTCATGAAC NGNGGANGNN 
    CCNCNNNNNC GAAAATGNNT NTTCNCCGGA ANNCNGNNNT TTANCAANAT 
    TNTNATAGTN ANNNNAGACN NNTTTGNTNA ACCNGGCNGC ATTTNCNNTT 
    NANATACANA N

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 60428 [Map]; Strand: c
      • AT1G01120.1 - [+] show detail - 3-ketoacyl-CoA synthase 1
        Distance: -1261; Region: intergenic
      • AT1G01130.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: CBL-interacting protein kinase (InterPro:IPR02066...
        Distance: 1477; Region: intergenic
    Flanking Genome Sequence: 13-1997-1 - 3-prime edge 
    TTTCTAATAT CGTGATTACT GGGAAATAAT AGAGAAAAAG AAAACAAAGA 
    CAAAAGGCAG CGACGTCGTT TCCATAATAT CGTGATTACT GCATGAAACA 
    CATGTTTCAA CAGTACGCAT ACCAACTCTC AAACTTTCAA TATTGGAAAG 
    ATCCAGTTCA TCAGATGCTA ATAATTCATA TATTTAGGTT TATGTACAGC 
    ATAATGAACA ATAGAGAGAA TTAATCAATA AACAGATCAA AGTATTAATT 
    TGCAAGATAA ATGAAATAAT GATGATAATA AATGGTAGAC TAGTACCCAT 
    GTGTAGACAT AAACCAACAA TTAATGTTGG TCGGCTTAAT ACCAACTAAC 
    TAGAAACCAG TCCGTCATCA ATGTATGAAT GTACACACTC ACATCTTGCA 
    ATAATTTTAA AAAGGACTAA CAATTTAAAT GGTTGCTACA TAAATAAACG 
    ATATAGCCTT ACATAAAACT AGCGAAAAAG GTTGATATTG GCTGTATAAC 
    ATGCACAGTA CTACCAGGCT CTAACATGCT TCAAAATACC GAATGATTCA 
    TTAAATTGAA ACATTAGAGT AAACATTTTG TCGTGGTCTT GTATTTGAAT 
    TTCAGTATAT AACTGTATAT AATACAATAT TATTGATTTT AATGGTTTTT 
    CAAACAATTT TTTTTTTNAA NACNCNAATT TTTTCTTAAT CTCNAATAAA 
    AAANATTAAN GCNNATNTNT GGAATATAAA TNTTNGGCNC NANNATCCNA 
    ATCCNCNTCC AATTNCCN

AT1G01120.1

Model type
Protein coding
Short Description
3-ketoacyl-CoA synthase 1
Curator Summary
Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis.
Computational Description
3-ketoacyl-CoA synthase 1 (KCS1); FUNCTIONS IN: fatty acid elongase activity, acyltransferase activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosolic ribosome, endoplasmic reticulum, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 11 (TAIR:AT2G26640.1); Has 3961 Blast hits to 3946 proteins in 966 species: Archae - 0; Bacteria - 1388; Metazoa - 0; Fungi - 5; Plants - 2408; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01130.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: CBL-interacting protein kinase (InterPro:IPR020660), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47170.1); Has 176 Blast hits to 176 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR