1. Home
  2. Mutant Lines
  3. 13-2011-1

13-2011-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2154 [Map]; Strand: w
      • AT3G01015.1 - [+] show detail - TPX2 (targeting protein for Xklp2) protein family
        Distance: 0; Region: intron6 (CDS)
    Flanking Genome Sequence: 13-2011-1 - 5-prime edge 
    TGGTTGTGCC TTAGGGACCA ACTCTTTCCT CAGCCTTCGT ATCTCTTCTT 
    CTTCTGCTAG CTGAAGAATC CATACAAGTC TGTCATTTAT TCCTACTAGT 
    TTACATAAGA AGCAAAAAGA GTTCCCTCTA ATCTATTTAC CTTTTGTTGG 
    CGTTCTCTTT CTGTTTTGTA TTGCTCGACT AGGTTTATTT TCTCAGTAAC 
    CTGATACAAT GAGACAATGC TGGATTTTAT CATACAAGAT CCACAAAAAA 
    GACTCTGCTT GTGTAGATTC AAAGTTGAGG TCATAACGAG AAACTGAAAC 
    ATACATAAAT CTCAATTATG TGCAAGATTT GTCTCAAATT CTGACCTGGT 
    AATCAAATTC TGCACGTTCT ACTGCTCGAA TGTCGGAATG GAGCTTTAAG 
    TCTACTGGTA TCGNGATATC TTTCACATGA GGCTTAACCA GATTCTGAAA 
    ACAGAGAGAA ACATTAAAAT CATCTGCTTA TGTTCCATTC TATATNCTAT 
    ATTTTTNAAA GTGAATTTCT CCGAAAGTCA TATATCAAAA TCAAACAGGT 
    TATATANATG ATCTGGTATG ATAGTATGTT AATGAAGAGG AAAGGGGTTC 
    TTTAGCTNAC CTCNGGTTCC ATCANGTTGT NCAAGGAAGA CCTTGAANCT 
    ATGGGGGATT CNCTTTTTNG CTTTTCTCCA ANGTACNNCT CAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2036 [Map]; Strand: w
      • AT3G01015.1 - [+] show detail - TPX2 (targeting protein for Xklp2) protein family
        Distance: 0; Region: intron7 (CDS)
    Flanking Genome Sequence: 13-2011-1 - 3-prime edge 
    CAACCAATGC CATACTTTGA TCGACCATTC ATTCCCAAAA GGTAAATAGA 
    AACTCCTGAA TTTCTGGTTT CTTGTTGATA GATTGATGAA CCATTTCGAA 
    GACTATCAGA TCGACTATTC TAAGTGTTGT TGTTTTCCAT TGTTGCTTAA 
    AGGTCGAACA AGCACCCGAC GGTACCTCGA GATCCCAAGT TTAATATACC 
    GCAACACAAG AAGATAAGAT GCNTGCAGTA CATCGTCTTG GAGTGACACT 
    GGATCTTACA TGAGCGACCT CTTATACCAA CAAGACCTCT AAACAAGCT

AT3G01015.1

Model type
Protein coding
Short Description
TPX2 (targeting protein for Xklp2) protein family
Computational Description
TPX2 (targeting protein for Xklp2) protein family; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT5G15510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR