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13-2197-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 189722 [Map]; Strand: w
      • AT2G01430.1 - [+] show detail - homeobox-leucine zipper protein 17
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-2197-1 - 5-prime edge 
    CTCTGGTTAA ACGGAGTTTC TTTCGCGGAG GAGTAGAGCC ATCATGACTA 
    AATTCTTCAT CGNCTNCGTC TTCANATGAC GGCAATCGGA TTCATGTCTA 
    GCCTTAGCAT GGTCTCTTCC TCCGCCACTT CCTTCATCTG AAACTTATTG 
    CGTGTATAAA TTATATTCAC AAGGACAAAA TGAAAAAATA TGTGATCATA 
    AAGAAAACAA GACAATGAAA AAACTAGTTA TATTTTTATG ATTGTCAGTT 
    TAGAGATTTT GTTTGTAAAA ACGAAATAAG ATAATCAGAT CATCCACCAA 
    AAGAAACATA GAATCCAAAC ACAATCTTCA TCATACATAT ATACTTGGTT 
    CATATAGTAG CTAGTTTCTT TTTGATCATA TTGAAAACAT GTATATATGT 
    GTGTAAAGCT

AT2G01430.1

Model type
Protein coding
Short Description
homeobox-leucine zipper protein 17
Computational Description
homeobox-leucine zipper protein 17 (HB17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 18 (TAIR:AT1G70920.1); Has 8030 Blast hits to 8017 proteins in 519 species: Archae - 0; Bacteria - 0; Metazoa - 5631; Fungi - 276; Plants - 1985; Viruses - 4; Other Eukaryotes - 134 (source: NCBI BLink).
Link
InterPro Scan - TAIR