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13-2231-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4636474 [Map]; Strand: c
      • AT1G13540.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-2231-1 - 5-prime edge 
    CNGGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC TCGTGACCCA GTTGTGTTCA TTCCTGTTCT 
    TGATAAGCCT CTATCTTCAA ACTGTTATTA CGCTATTAAA CGGCATGGGA 
    AGCATTCAGG GTATGAAGTT TAATCCGCAA ATCTGAAATT CTTGAATCTT 
    TCTTCTTATA TAACCTGAAA AAGTTTATAA AATTTTGGTT GCATTGCAGG 
    GAAGCGTCTG GAAGTGCAAA AGAGGACGAT ATAGTCTCCT GCTGCTTTTG 
    CTCTAGTTTT GTTCCTGAAG CCAAACCAAA ACAGTTAGAT CCTTTTGACA 
    TGTACCAACA ATTCAAGATC CATCAAAAGG AGCCTTCCTC GCGTTGTTAC 
    TACGCAACAT CTGTCGCTCC TGACGGGGTC CCACCATGGT TTCTGAGGAA 
    AAAAGAGTGG ACGGTTGAAT ACTCGAGGTT CCAAGACTTT GAACTGAGAG 
    ATGATGCAAA AGGACTCATC ACAGAGCTTC GTACTGAGCT TCCTCTTCTT 
    GGTATGAGCA CTGTGGTTGG GAAGTGGTAT GTCCCTTTCA TATTCGTGAA 
    AGAAAGAGAG GTAAAGGATC AGATCAGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4636468 [Map]; Strand: c
      • AT1G13540.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-2231-1 - 3-prime edge 
    NTTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCA 
    TGGGTCACGA GTGCTGTCAT CACCTCCAAT ATTGAATGTG ACTGCTAGCT 
    TAAGATTTTG GGGCAATGGC AAACCACTTA GAGAAGAGTC CACAACCAAC 
    CACGAGCCGA AGCAAGATGT AGCCCGTGTC CGTGAGTGTT GGTCTTGGAT 
    TACCAAAATT CCAGAATTTG GACCCTCAGG AGGAGGCTGT GTTAGCTCTG 
    CTGGATTCCT CCGGTACTCT GAGAAACTCC TTGTGATGTA CATTGTTTCA 
    CTAAATCGAG TTTTGGACTT GGAGAAAAAC TTGATCCTAT ATTATAGAGT 
    AAACAACTCT GTAGAACAGC AACTGACAAG GTGACTTGAC TTTTCTGGAT 
    GGCTCGTTGT AGGAAACTTC AAAGAAACTT ACTTGATCTC CTTAAAGATC 
    CTAGCCTACC CTAATTTCAC CTCTCATCAA GTGTCTCTAA AATAAGATAA 
    ACAAAGTCTT CGCCTCTCTG TATCATGACA CCACTCTGCA TCATGAAGTA 
    TTCAACGCTC CAACAACTCT GAAAGATGAC ATTTTTATTT TCATTTTAAA 
    CAGAGTTTAC ATCAATGTAA AAGCAGAAGA CTAAATAAAA GAGAGAAGCT 
    CACAAGTCAN TATTGGATAG TCCTCAACTT ATCAGCATGT CTAAACTCAT 
    ATGTCAACAC CAAACTCTCA TCCATTCTTT TNAATTCAAA TTTTTCTACC 
    AATACATAAC ATTTATAACT CTTTCAATGG CGAGAACCGC CT

AT1G13540.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1262)
Computational Description
Protein of unknown function (DUF1262); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13510.1); Has 101 Blast hits to 94 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR