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13-2241-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23231344 [Map]; Strand: c
      • AT1G62730.1 - [+] show detail - Terpenoid synthases superfamily protein
        Distance: -608; Region: promoter
      • AT1G62740.1 - [+] show detail - stress-inducible protein, putative
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-2241-1 - 3-prime edge 
    CGTGGAGGCG TATTCGAAAG GGCTTGAGAT TGATCCAAGT AACGAAGGTT 
    TGAAATCAGG TTTAGCTGAT GCGAAAGCT

AT1G62730.1

Model type
Protein coding
Short Description
Terpenoid synthases superfamily protein
Computational Description
Terpenoid synthases superfamily protein; FUNCTIONS IN: transferase activity; INVOLVED IN: biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 1013 Blast hits to 1013 proteins in 466 species: Archae - 0; Bacteria - 638; Metazoa - 104; Fungi - 106; Plants - 45; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G62740.1

Model type
Protein coding
Short Description
stress-inducible protein, putative
Computational Description
stress-inducible protein, putative; FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion, response to stress; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: stress-inducible protein, putative (TAIR:AT1G12270.1); Has 44605 Blast hits to 18649 proteins in 1479 species: Archae - 1696; Bacteria - 14533; Metazoa - 9820; Fungi - 2891; Plants - 3854; Viruses - 4; Other Eukaryotes - 11807 (source: NCBI BLink).
Link
InterPro Scan - TAIR