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13-2248-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6302041 [Map]; Strand: c
      • AT1G18310.1 - [+] show detail - glycosyl hydrolase family 81 protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-2248-1 - 5-prime edge 
    CTCGCTAAGT TTGATCCTTT GTGGGGAGAG AGATACAGAG CTCAAGCGTA 
    CAGTCTATTG GCGGATTTCA TGACGTTTGG GAGAAAAGAT GATAATAATT 
    CAAATTCTAG TTATCCGCGT TTGAGAAATT TTGATCTTTT CAAGCTACAC 
    TCATGGGCTG GAGGGTTAAC AGAGTTTTGG GACGGCCGGA ATCAAGAGAG 
    CACAAGCGAG GCCGTAAACG CTTATTACTC CGCCGCTTTA TTAGGGTTAG 
    CTTACGGCGA CAAACATCTG GTGGAGACGG CGTCAACGAT CATGACGCTT 
    GAGATACACG CCGCGAAGAT GTGGTGGCAG GTAACTATTC TTGAATCTTG 
    GTTACGGCTA TCAACAAGTT AGAATTGGTA GATATGTCCC TCTCTATATG 
    AAAAACCAAA CTAAAAATTA AGACACCAAA ACCAAAACAT AATTTTCGTA 
    ATGAAGATAT ACTTTTTAAA ACAATATTTA AATCAAAAGA AAATCATATT 
    GAGCCAGTTA CTGTTATTCT TTCTTGGTGG ACAGGTGAAG AAAGGTGAAG 
    CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6302160 [Map]; Strand: c
      • AT1G18310.1 - [+] show detail - glycosyl hydrolase family 81 protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-2248-1 - 3-prime edge 
    GCGAGCACGG CAATAGCGTA GAGAAAGTAA CCAATATGGT AATGATGATC 
    ATTATATATA CCGAACCCGA AATCAGCTTG TGAATCTTTT GATCCTTGCT 
    TCGTGATCAA ACCTCCCCAT TTAGGATCAT ACAGAAAGCC GTTAGGTTTG 
    AAGCTACCAT CTAACCACGG CTCAATCATG TTCTTCAGGT AAGTTACAAT 
    CTTCGGAATC ACATCGAGAT AGCAAACTTC CTCGGCGATT AAGGCAAACC 
    TAGCTGCTCT GGCTATTAAT TTCCCGTAGA AATACGACGA ACTCGTGACC 
    TCAGCTGAGG AATT

AT1G18310.1

Model type
Protein coding
Short Description
glycosyl hydrolase family 81 protein
Computational Description
glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: cell wall macromolecule catabolic process; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT5G15870.1); Has 441 Blast hits to 435 proteins in 142 species: Archae - 0; Bacteria - 86; Metazoa - 4; Fungi - 179; Plants - 58; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Link
InterPro Scan - TAIR