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Mutant Lines
13-2292-1

13-2292-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 65848 [Map]; Strand: c
  - AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
    Distance: 369; Region: intergenic
  - AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
    Distance: 3425; Region: intergenic
Flanking Genome Sequence: 13-2292-1 - 5-prime edge
```
GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC CAAATTGGTA AGTAAAGATT TTGCTTCATG ACTTTTCTTG 
TGGTCGGATT AACATACTCT CAGGAGAATA ATTGTGATCT GTTTTGTTGT 
TGCAGACTCA TGGTCTTGCT GAGTACATAG CTCAAGTGAG AAACTTTTCC 
CTGAAAACTT CCCCATTTTG TTTGTTTAAT ATTAACAAAT TGATTGTACG 
TTTTCAATGT CTCTAGTCCT CTCTTGATTG ATTGTACATT TTCAATGTTT 
TGT
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 65856 [Map]; Strand: c
- AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: 377; Region: intergenic
- AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: 3417; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
AAAACACATA GAAGCCTAAT ATAGATAGAT ATCATATCAC TCACCCTAAC 
ATAAAGAAAA CATATAAAAC TTGTCTATTT AGCTGATTAA ACAATCAATC 
GGCTTCTCTT ACACAACATG TTGTTAATCT TTGCTTTAAA CTTAACTATG 
TCTTCTATTC TAACCCCACT CTTACATCTT TTCTAATGAT CGTCATTAGC 
CCGAAGATTT ATGAAACATT CATATACTAC TTATAACAAA GGAGGAGTTA 
TATATCTACG TGTCTATAAA AACATACTTT CTTTGGTACA TCTTTTCTTT 
TTAAGAAAAA AGTTATTGAA GATC

AT4G00160.1

Model type: Protein coding
Short Description: F-box/RNI-like/FBD-like domains-containing protein
Computational Description: F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00165.1

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: N-terminal protein myristoylation, lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR