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13-2319-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22804129 [Map]; Strand: w
      • AT5G56310.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 13-2319-1 - 5-prime edge 
    GGATAAAACT AACAAAATGC GGTTATACAG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATCC CCCGCGCCTA GATGAAAGGC CAAACCGATG 
    CCTCTTCTTC TTAAGGAAGG TTTCAAGTTA AGGCTCACGG CTTCAAGCT

AT5G56310.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 21 (TAIR:AT2G20540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR