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13-2329-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3681242 [Map]; Strand: c
      • AT1G11040.1 - [+] show detail - HSP40/DnaJ peptide-binding protein
        Distance: -318; Region: promoter
      • AT1G11050.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -646; Region: promoter
    Flanking Genome Sequence: 13-2329-1 - 3-prime edge 
    TCGNGNGNCN GGNGGGCGAA TNANCAGANC CGGCCGTTGA CCATTCTGNN 
    CNCATTATGG ATACACTCAA AAGATACATT TAGCAGCGGT ACATTTGTAG 
    ACTTGTATAG TTTATCGAAA GTGCCTGAGC ATATTGACAT GAGAATAACG 
    AATGATCAGC CGTTTCGGTT GTAGTTGTTA CAATCTTCGG TAGTTATGGT 
    ATGTTGCATT ACATTATTGT TATTTTTATC CGAAATAGTG GATC

AT1G11040.1

Model type
Protein coding
Short Description
HSP40/DnaJ peptide-binding protein
Computational Description
HSP40/DnaJ peptide-binding protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: HSP40/DnaJ peptide-binding protein (TAIR:AT1G44160.1); Has 19507 Blast hits to 13358 proteins in 2831 species: Archae - 102; Bacteria - 8184; Metazoa - 2012; Fungi - 1146; Plants - 786; Viruses - 38; Other Eukaryotes - 7239 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11050.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink).
Link
InterPro Scan - TAIR