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13-2425-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3680463 [Map]; Strand: c
      • AT1G11040.1 - [+] show detail - HSP40/DnaJ peptide-binding protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-2425-1 - 3-prime edge 
    CTCTCCGAGC AGCAATGAGA TCATCCTCCT CCGCAAATTT CTCCTCCAAA 
    TATCTCCGGT GGATTGCCTA TCAATTTTTA CAAACAAAAA TATTATTTTA 
    CTCTGTTCTC ACGATCTCTG GATTGAAAAA TGATTTTTTT ATTTTACGAA 
    ACAGAGGTTT TCACAAACAA TCCTCGAAGA GATAAAAAGA AGAAAGAAAC 
    GGAAATCCAT AATGATATAA ATCGAATATT TCGCCGTTTG ATCATTGTTG 
    GGAACAATTT ATCTATTTCT ACGTTATTCC ATAGCAAAAA TCATTGCTCA 
    AATGTGAAAA CGTAAATGAA ATGATGATCA GAAAATAGCG TTCGTCACAA 
    TAAGAGAAGA TGTTAATTAA ACGTACGGAA TCGGCGTCGG AATGGGATTC 
    GGATTTGCGA TGAGAAGAAA GAGGGTGCAA TTTGGTGACG AGGGACTTGT 
    AGGCTTTGCA TGCTGTCTTG GAAATTCCAA AGAAATCTGT AGCCGGCGAA 
    CGAGGAGTCC CCATTGTATC CAGAACAAGA AGATGATGAT CAAGAAATTG 
    GCGGAAAGAG AAAACAGAGA GAAAGATGAG GAAACTTGTC GTTGTCGTGT 
    GTAGGGATGA ATTANATTAT CAGACAGACG AAGAGCCGAG TTGNTTGGGA 
    GAGCTTTTAT TAGGAAATTT CTGTTTTTTT GGTTTCCCGA AATAAAAATA 
    NTTTTTAAGA AAATTTATAG GCTTTTCTTA TTAATN

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3680354 [Map]; Strand: c
      • AT1G11040.1 - [+] show detail - HSP40/DnaJ peptide-binding protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-2425-1 - 5-prime edge 
    TNCGAGAGGT CTCCGGGTCA AGAGCATGGA CGATAGNAGC GNCTTCNANC 
    NTCGTTCTTN TNTGNTAGCA TACGTCANGT AGNCGGCCTG NAGCACACCC 
    GNNCGNNAGC GTANACCNAC TGNACCTNTN TTCCTCCGCT TCTTCCAACC 
    GCCGTTCTGC TTTCTCAAGA AGCACAAGCC GTAGAGACGA AGGCAGCAGC 
    CACAGCGGAG TGAGAAGCCA CGGTTTGAAA TCACGTCCCA TCTCAAACAA 
    CACCAGTCCG ATGACGTCAC CTTTCACGAG TCCTAGAGGA AAAGATCAAA 
    CCTTAGGTGA TTTATTCGGA TCTGTAAAGA AACTTTCGTC TCCTACAAGC 
    AATAGTCCGA TAAACGGCGT CAAACAATCT TCTCCTTCGT CGATTTTGAA 
    GAGTGCTAGC AAGAGAGATA AGGATGAAAG AGGCTCTACG AGCTCGGCGA 
    CATCGACCTC TCTGCCATAT TCAAAGAGTA AGAGCACGAG GGATACGGCT 
    GGATCAATTG CAAAGAGTAT AAGCCGGAGA AGCACAACGC CGATAGTGTT 
    TTCGCNGTCT ACACCGCCGA AAAAACCACC AAGCTGTGGA GAAAAAGCTA 
    CNANCCCGGG GCCGGGCNAC CNNNCNTGCN NCTATANTGA GGGNGGGTTT 
    ANANCNNCCN CNANCNNNNG TNNNNACATN NNTNNNNTNG TNNNAGTGCG 
    NTCCNNCNNN NCCACANNNN NCNANNNT

AT1G11040.1

Model type
Protein coding
Short Description
HSP40/DnaJ peptide-binding protein
Computational Description
HSP40/DnaJ peptide-binding protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: HSP40/DnaJ peptide-binding protein (TAIR:AT1G44160.1); Has 19507 Blast hits to 13358 proteins in 2831 species: Archae - 102; Bacteria - 8184; Metazoa - 2012; Fungi - 1146; Plants - 786; Viruses - 38; Other Eukaryotes - 7239 (source: NCBI BLink).
Link
InterPro Scan - TAIR