1. Home
  2. Mutant Lines
  3. 13-2497-1

13-2497-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16573638 [Map]; Strand: w
      • AT2G39730.1 - [+] show detail - rubisco activase
        Distance: -90; Region: promoter
      • AT2G39730.2 - [+] show detail - rubisco activase
        Distance: -90; Region: promoter
      • AT2G39730.3 - [+] show detail - rubisco activase
        Distance: -119; Region: promoter
    Flanking Genome Sequence: 13-2497-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TGGGCACAGA TTAGCCATTT GACGACAACC TCATAAACAT ATTCCACGTG
    GACCAATCAA AATAGAATCC TCCTAATCAT CTTCCTCGTG GCAACTTGGC
    CAATCCGCAT CGTGTGGCGA TCAGAGAGTT AAGCCTTGAA GACGAAGAGA
    TAACGAATTG GTTGTTGATC ACTCGCTTTA TAAATCTCTC AGTTTCTTGC
    TCACACCAAC ATCTCTCTAA GCT

AT2G39730.1

Model type
Protein coding
Short Description
rubisco activase
Curator Summary
Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.
Computational Description
rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 11 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2406 Blast hits to 2358 proteins in 526 species: Archae - 328; Bacteria - 489; Metazoa - 254; Fungi - 429; Plants - 406; Viruses - 0; Other Eukaryotes - 500 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G39730.2

Model type
Protein coding
Short Description
rubisco activase
Curator Summary
Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.
Computational Description
rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2331 Blast hits to 2283 proteins in 512 species: Archae - 328; Bacteria - 459; Metazoa - 248; Fungi - 427; Plants - 404; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G39730.3

Model type
Protein coding
Short Description
rubisco activase
Curator Summary
Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.
Computational Description
rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink).
Link
InterPro Scan - TAIR