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13-2505-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
vascular leaf (PO:0009025)
  • decreased length (PATO:0000574)
    (Leaves::short petiole)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 993278 [Map]; Strand: c
      • AT3G03860.1 - [+] show detail - APR-like 5
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-2505-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT AATCCTAATT AGTATGGAAA TAGAACAATA 
    GACAATGTAG TCTTTGGAAA AACAATAGTA AGTAGACTTC TTACGATGGC 
    AGTGCTTGAG AATGCTCCAC AGCTAGGTGT TGTATTTGAG GAAACATGGA 
    ACTCAACATA TCAAACTTAG GGCGCACAGC ACGTGAGAAT GGGCACCAGG 
    AAGCATAAAA GAGTACAGAC ATATAAGCAT TTCCATGTTG TGAAGCCATT 
    AGCCTGTCTA GTGAGTCTCC ATCTACCTGC ATAGTGAAAA TTTTGACACT 
    GCTTTAGTTA AGAATAAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 993271 [Map]; Strand: c
      • AT3G03860.1 - [+] show detail - APR-like 5
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-2505-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGATTAGGAT AAATAGCAAG GAAGTGGGAT TGAATGATTC ACATCAAGAA 
    TTTTTGGGTA CTGATAGTTT AGTTTGAGAG TAAAAAAAAC TTAAATTGCA 
    TATCAGTTAT TTAATAACTT GATCCATATA AGGTGCNTTC TTCTTTTCAC 
    TTTTAGTAGA AGGTCATGTG TGTTTGCNTG TTACGTTATC TTACATTTCA 
    TTAGCAAATA TTCATTTGAT CTATCATTAA CTAGTTAGTT CATCATTACC 
    TTATCTGCCT TGTGTATACT AAGTTACTAG TAGGTTCAAG TGCTTTTAGG 
    TTTCTTCATG TGTCTGGCTG TTTCTTTTGT CTTACTAACT GGTTTCATTA 
    ATTGCTTTGT TGCAGTGTCT TTTCTAGGTA TGGTATCCAN ATGCTTACCT 
    TCAATCCTGA TGGTAAATCA AACTTTAAAT GCTCGGTACC ATGGTCGAAA 
    GGATCTTATA TCCCTGATTG AGTTTTATGA AGAGGCAACA GGTGATACAC 
    CAAACCACAT CGTCTGCTTT TAATTTCTTT CAGTCTACCT GAGTAGTCTT 
    TGTTTTATGT CCAACCTATG ACTAGCACAT TTTGGGTGGA TCGATTTANA 
    AATAACTGGT TGTTGTTCTG GCTTTCCAGG CCTCCAACCT GTCCANTNTG 
    TGGCTGAAGG GGAACCANCA GGCTTAAATG CCCGGNNATG GTACCTTGAT 
    CACATGGGTN GCCCANGGGG ACNTCTNTTN NANAAATATT CCAACAAN

AT3G03860.1

Model type
Protein coding
Short Description
APR-like 5
Curator Summary
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.
Computational Description
APR-like 5 (APRL5); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 7 (TAIR:AT5G18120.1); Has 278 Blast hits to 278 proteins in 73 species: Archae - 0; Bacteria - 38; Metazoa - 82; Fungi - 10; Plants - 137; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR