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13-2592-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8898322 [Map]; Strand: c
      • AT1G25370.1 - [+] show detail - Protein of unknown function (DUF1639)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-2592-1 - 3-prime edge 
    ATCCCAATGA AATCTTCTTC CATCTCCTTC TTCGATAGCT TCATAGAGAA 
    CATAGGACGC TTCTTCTCCG CTTCGACCAC TCCGCCGCCG CCTCTCACCG 
    GAGATGGATT CTTCTCCTCA ATCACAATTC CTTTATTGAT CAAACTGTTG 
    GATTCCGGTT CTTTACACGC TGCTGCTCTT CTTTTCCTTA GATTCCACGG 
    CTTCACCGGA GGAATCATCT CCTTCTCTTG ACCGGAACCA GAACCAGAAC 
    CAGAACCGTC GATTTGTTCC TCTTCCTCTT CGGTTACGTC TTTGTTAAAC 
    ATCGATTGTG TGATCTTATC TGTCTCCGTC TTCAGATCCG ACATAAGCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8898206 [Map]; Strand: c
      • AT1G25370.1 - [+] show detail - Protein of unknown function (DUF1639)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-2592-1 - 5-prime edge 
    ATTGGGATGG TAGGTCACCG AGCACCGCTG TCGGCCCAAG AAACGGTCCA 
    AAACTGTTCA GAAAAAACTC GATGTAAGTC TTTTAGATTT TGCAATTTGG 
    TGAACGATTT GAAATTTTTT TGTTAGATTT TTGTTGAAAC TGAAATTTGG 
    ATTCTTTTTG TTCTTTGCAG AGTTTGTTTC CAGGGTTGTA TTTGACTGAA 
    GTGACACATG ATGCATATAA GGTTCCAGAA TAAACCAAGG TATAATCATC 
    AATCATCATC ATCACGGATT TGAAAAGCT

AT1G25370.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1639)
Computational Description
Protein of unknown function (DUF1639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT1G68340.1); Has 265 Blast hits to 265 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 264; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR