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13-2603-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3157863 [Map]; Strand: w
      • AT1G09750.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-2603-1 - 3-prime edge 
    TTTAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TNCNCATGNC 
    NTNCTCGGAC CACGTNGTTC CCGATGTGGA GCTGATTACC GGAGGCGACG 
    GGGACNGAGG TGGGTTTTGG TTTGCCGGCG ACGAGGCTTG AGAGGTAGGT 
    GAGTCGATGG GAGTCTGAGG AGGCCATGTG AAGGACCGTG TCTATCACGG 
    AGGCAGAGAC GTGAGTGGGT GCGAAAGGTG AGCATTTGGC GTTAATGGGG 
    ATGATTGAGA GGTCGTCGGA ACCATCGGGA GCGGCGGTCG CACATGTGTC 
    ACGTGTGGCG GTGGTGAAAG TGAATGGCAA GAGAAGTGTC AAGAAGAAGA 
    AGAAATGGAG ACTTGAGGAG GCCATGGTTT TGGCTAATGT GATTGTGTAN 
    AGATATTTAG ATAATGTTCT TCGAGTGTGA TGTGGCCTTT ATATATGGCC 
    AGCGAGGTAT TGAAAATGTG AAAATGTCCC TCGAATTN

AT1G09750.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 2762 Blast hits to 2753 proteins in 256 species: Archae - 0; Bacteria - 2; Metazoa - 415; Fungi - 350; Plants - 1861; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink).
Link
InterPro Scan - TAIR