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13-2633-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 88029 [Map]; Strand: w
      • AT4G00210.1 - [+] show detail - LOB domain-containing protein 31
        Distance: -1134; Region: intergenic
      • AT4G00220.1 - [+] show detail - Lateral organ boundaries (LOB) domain family protein
        Distance: -2007; Region: intergenic
    Flanking Genome Sequence: 13-2633-1 - 3-prime edge
    CAAGGCCCGG CCCATTAAGG AGAAGGCTTT AAATTAGGGA AGTGAACAAG 
    GGTCAGGGAT CTTGTCAAAC AGAGAGAAAG AGAGACATGA CAGTAACTGA
    CTGACTGAGG TTGTACTTGC GGGGGAAGCA AACAGTGATC AGTGTCATGT
    CTGTTTCTGA CTATACGATT TGTAGAAACA AGAAGCAACA TACATCTCGA
    TTTTCTCTCT ATAATTCTAT CACGAAAGCT GTCCATAGAG AACTAGTTTG
    ACAAAAAATT ATATACAGTA TATAACATAT ATAAAAGAAT TACACACGTG
    TGGTGAGGGA TCGCACGTGT GTGTGACAGG GAAACCTGCG GCTGAGTGGT
    GAGAGAGAAA TACGTCAGCA AGCAGCTAAT TGTGTTTTGC TTCACGCAAA
    GCATTTGTGT TTGTTTGTCC TTTGTATATA TCACAAATCT GCTCTGCCGT
    TGCTTCCAAG CT

AT4G00210.1

Model type
Protein coding
Short Description
LOB domain-containing protein 31
Computational Description
LOB domain-containing protein 31 (LBD31); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 19 (TAIR:AT2G45410.1); Has 416 Blast hits to 414 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 416; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00220.1

Model type
Protein coding
Short Description
Lateral organ boundaries (LOB) domain family protein
Curator Summary
Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves.
Computational Description
JAGGED LATERAL ORGANS (JLO); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 18 (TAIR:AT2G45420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR