1. Home
  2. Mutant Lines
  3. 13-2639-1

13-2639-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28425281 [Map]; Strand: w
      • AT1G75700.1 - [+] show detail - HVA22-like protein G
        Distance: 350; Region: intergenic
      • AT1G75710.1 - [+] show detail - C2H2-like zinc finger protein
        Distance: -3425; Region: intergenic
    Flanking Genome Sequence: 13-2639-1 - 5-prime edge 
    GNTGCCGCNA CCNCTGGTNC GGACCNAGCA CCNATANGTA GAACNATGGN 
    TTGGNNAGAN AGAANACNNC AATCNCTNAC ANAGTCCCGA TAGAAANTGG 
    AGAACACANT GATCATTNCN TGTCCCNATC GAATCANTNG ACCATACTCT 
    NACANTATCA TTNGGATGNT GANTGATGTT GAGAATNNNG NGGGATGTGN 
    GCGGAACGAT GNGGAGTATC CNTGGNGACN NATCACNNNC CCTGGGCCAN 
    TAGGCCAANC TGGGCACCGG ATTAACCCGC TCTGACAACT CCTACCTAAA 
    TCTTTAATTT TAAAATTCAA AAAAATTACA CTAGTAGGTC AATATTACAT 
    TTTATCCCAA AAGAAAAAGA ATTAAAGAAA AAAAGAACAC TCTGCAAAGT 
    AAATAATAAA ATTAAAGGAG TTACACAAAA ATGATACATA ACCAGAGGAC 
    CACACGGCTA CAAGTCGTGA CATATCATCA TTGTGTGGAA AAACACATAA 
    ATATTTACAA AAATTCTAGA GATGGCCTAT CCAATATGGC ATTGTATGTG 
    TACGTACAAA TTACCAAATT TACCAATAAC GAATGCAGAA CTTCATAAAT 
    TAATGAGTTG NGTAGAGAAA TCAATAATTG AAGAAGGATG CANCCGATGA 
    TTGATGAATT TACTATAAAA ATTAGGGACC ATTTTTGA

AT1G75700.1

Model type
Protein coding
Short Description
HVA22-like protein G
Computational Description
HVA22-like protein G (HVA22G); CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22-like protein H (ATHVA22H) (TAIR:AT1G19950.1); Has 1473 Blast hits to 1473 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 703; Fungi - 189; Plants - 488; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G75710.1

Model type
Protein coding
Short Description
C2H2-like zinc finger protein
Computational Description
C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 773 Blast hits to 521 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 55; Plants - 387; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink).
Link
InterPro Scan - TAIR