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Mutant Lines
13-2714-1

13-2714-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 17885685 [Map]; Strand: c
  - AT4G38090.4 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
    Distance: -864; Region: promoter
  - AT4G38090.1 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
    Distance: -959; Region: promoter
  - AT4G38090.2 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
    Distance: -959; Region: promoter
  - AT4G38090.3 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
    Distance: -959; Region: promoter
  - AT4G38092.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 13-2714-1 - 3-prime edge
```
ACTATTACCG TCTTTCTGAG TTTATATGAA GTACGAAGTC TCTTTGCTTA 
TAAAAGGCTT GTCATGGTCT TTGTTTGTGC TTACCTCATG TGTACTTGAC 
ATTTCCCTTT CTTTCGTACA GATTAATAGT AATCCAGTTG CNTGCTGAGG 
CAACCATTTT GTCGCTTCAC CAATCCCCAC AGCCGTATAA GGCGTGTAGA 
TATATTCTTG GTAAGTCTTT CTGATGAATC CAGAACCGGC CAAGTGGACT 
TGGGAAGTTT CATCTGTTTG ACTGAAAGTG TTTTCTACTT CCAGAAAATT 
CTCAGGTGGC AAATGCTAGG TTTCAAGCTG CTGCAGCTAT TCGAGAACCA 
GCTATCAGGG AATGGAGCTT TCTTGCCACC GATGATAAAG GCGGCTTGAT 
TAGGTATTTT TTCTTCTTTT ATGTTATTTG GGTGATATAT GCTTAAGCT
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 17885580 [Map]; Strand: c
- AT4G38090.4 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
  Distance: -759; Region: promoter
- AT4G38090.1 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
  Distance: -854; Region: promoter
- AT4G38090.2 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
  Distance: -854; Region: promoter
- AT4G38090.3 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
  Distance: -854; Region: promoter
- AT4G38092.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
  Distance: 0; Region: intron1 (CDS)

GTAGNANNNG NNNAGCATCG ANAANACTAC NNGNNCCCGT NNCGCNGCTN 
AATACACCNG GNGACGTNGA GANCAACCAA CACCCAGTAA ANAAGAGCAA 
CTCTGATAAT TTTCAATACG TCTACAGNGA CTTCAATTTC AAGCCAAACA 
AATTACAAGA AAACATAAAA AAAAACAATT TCATAAATGC AACCACACAC 
ACACATGTTC CTCCAGTATA TTAGGAAACC AAAACGATCA ACCAGGAATA 
GAGCGAACCA CTTGTTTATG CATATATGTA TGAANAAAGA ANAAGCAACA 
ACCTGAATAT ACATGGCAAT GATACATATA AACCTAAAAG GGGATTTTCC 
AAAAAGTTGT TTTTNGATCC TCTGTTTTTT ACTCTATGAA AACANAATCG 
TTTATAATGA TNAAACATTG CCNGCATACA AATTCACAAA ATTGGGNGTT 
TTTGACATAC AAANGATTTC AAAATAACCT AAAAACTNTA TTAAAACTCA 
ATTGGCATGN GAAAAAAACT GAACTTTGGA TCAGGATNGA TANAAGAAAC 
NANAANTGTA NATTATNACA ACNGGAGCTA GCAANATGTN TANTATTNCA 
CTTTTTTATA NAGTTTTNTA AGCCAATCAA AATGTTCTNT TTACACCCAC 
TCNNCAAAAG NGANGNGTTG ACCGCGNTNA NAANCAATCT NGGGGNGGNA 
CCCNTTNNNN AAAANNGNCN NTTTNGAGTT NNCNCACNNN CTCNAANATN 
NNNAN

AT4G38090.1

Model type: Protein coding
Short Description: Ribosomal protein S5 domain 2-like superfamily protein
Computational Description: Ribosomal protein S5 domain 2-like superfamily protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0029, Impact, N-terminal (InterPro:IPR001498), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38090.2

Model type: Protein coding
Short Description: Ribosomal protein S5 domain 2-like superfamily protein
Computational Description: Ribosomal protein S5 domain 2-like superfamily protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0029, Impact, N-terminal (InterPro:IPR001498), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); Has 3816 Blast hits to 3816 proteins in 1926 species: Archae - 79; Bacteria - 3485; Metazoa - 43; Fungi - 32; Plants - 52; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38090.3

Model type: Protein coding
Short Description: Ribosomal protein S5 domain 2-like superfamily protein
Computational Description: Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0029, Impact, N-terminal (InterPro:IPR001498), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38090.4

Model type: Protein coding
Short Description: Ribosomal protein S5 domain 2-like superfamily protein
Computational Description: Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0029, Impact, N-terminal (InterPro:IPR001498), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568).
Link: InterPro Scan - TAIR

AT4G38092.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR