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13-2776-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3925193 [Map]; Strand: w
      • AT1G11660.1 - [+] show detail - heat shock protein 70 (Hsp 70) family protein
        Distance: 638; Region: intergenic
      • AT1G11670.1 - [+] show detail - MATE efflux family protein
        Distance: 2969; Region: intergenic
    Flanking Genome Sequence: 13-2776-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA ATTCCTATAT CACATCGCAA TCTTCGCTAT 
    ATAAGATTNG TTTTATTTAG AACTTTCNGT TTATATTCAA CTCGAATACG 
    GAATATAAGT TTTTTTACGA ATNGTAAACT TAAAAAACCT AAANGAACAA 
    ATTAAACCGT TAGTAATATT TTGNGACGAA AAGTAANGTT ATTAAAGATT 
    NGTTTACTAT TATTTTAGTA ATTCTGGAAN GTTTTATAAA TAANAGAAAA 
    GAATT

AT1G11660.1

Model type
Protein coding
Short Description
heat shock protein 70 (Hsp 70) family protein
Computational Description
heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G79920.1); Has 25020 Blast hits to 24886 proteins in 4391 species: Archae - 151; Bacteria - 11311; Metazoa - 3542; Fungi - 1480; Plants - 1013; Viruses - 97; Other Eukaryotes - 7426 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11670.1

Model type
Protein coding
Short Description
MATE efflux family protein
Computational Description
MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, N-terminal protein myristoylation, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G61890.1); Has 11525 Blast hits to 11473 proteins in 2135 species: Archae - 258; Bacteria - 8318; Metazoa - 144; Fungi - 328; Plants - 1428; Viruses - 0; Other Eukaryotes - 1049 (source: NCBI BLink).
Link
InterPro Scan - TAIR