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Mutant Lines
13-2790-1

13-2790-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 11929699 [Map]; Strand: w
- AT2G28000.1 - [+] show detail - chaperonin-60alpha
  Distance: 310; Region: intergenic
- AT2G28010.1 - [+] show detail - Eukaryotic aspartyl protease family protein
  Distance: 880; Region: intergenic

TCCCTGTATA TATACTTAAC TTTACAAGAA TATATGGATT GTCATGTCCT 
GTGAAAGTAT TGAAGATAAC TGAATATGAA GGAACAATTG AAGAGCTAGA 
GGAAATGAGA CATTTCATAG AGAAACTGTC ATGTCTTGTG CNTTGTCAAA 
GTTCGTGCCT GTGCAATAAA CGACAAGGAG AAGTATCGAA TCACCGGAGA 
TCTGCTAATG GTTCGTAGAT CATCGAAGTG CAATATCCAG ATCAAGTTTT 
ATGAGAAAAC TAGTAAAGGC ATGAAAAAAC ATTGTTCCCT CCTAGTTTAA 
TAGTATAGTA AGTTGGAACA TTATTCAGTT TGTACGCATA TTTGCTTATT 
GTTCTGCTAA ACTACTCTCG CTACATATAA AATGTTTGGT CGCATACATA 
ACCATTTTCT GCAATTTCCA TTGGACAAAA AAGATGATAA TTATTTCTCG 
ATACTGTTAA CAAACTACTC ATATTCCCCC AAAAAAGAAA AACATTGCAG 
ATAAATGGGG ATGACAAATG TGCAAAAAGA CAAAGATGCC ATTGTGATGA 
TAAGATGTTG TGTTTTGATT ACACCATGAG ACCCTCAGGA GCAGCAGCAG 
CAGGAGCCTT GGGTTTCGGG TTGTCAACAA CAATGGCCTG AGTGGNCAGT 
TCCATTTCCT GCTACGGAAG CAGCGTTCTG TANCCCACAT NTTGTCACTT 
TANNCGGATC AATCACTCCA GCTTCNAAAA GATCTCATAT GTNNANNCAT 
TGNGTTGGNN CCATTCTCCC AATCG

AT2G28000.1

Model type: Protein coding
Short Description: chaperonin-60alpha
Curator Summary: Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development.
Computational Description: chaperonin-60alpha (CPN60A); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, chloroplast organization, embryo development; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G18820.1); Has 33896 Blast hits to 33887 proteins in 8716 species: Archae - 792; Bacteria - 21835; Metazoa - 1656; Fungi - 1573; Plants - 797; Viruses - 2; Other Eukaryotes - 7241 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G28010.1

Model type: Protein coding
Short Description: Eukaryotic aspartyl protease family protein
Computational Description: Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G28030.1); Has 3345 Blast hits to 3331 proteins in 275 species: Archae - 0; Bacteria - 0; Metazoa - 954; Fungi - 478; Plants - 1718; Viruses - 0; Other Eukaryotes - 195 (source: NCBI BLink).
Link: InterPro Scan - TAIR