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13-2812-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4796804 [Map]; Strand: c
      • AT1G14000.1 - [+] show detail - VH1-interacting kinase
        Distance: -554; Region: promoter
    Flanking Genome Sequence: 13-2812-1 - 5-prime edge
    ATCCGGATAA CATGGAATCA CATCTATCAC ATGATTTTTA TTAAGTAATA 
    CACTAGCATA TGCCTTTAGC ATATCTATTT TTATCTAAAC AAAAAAAAGT
    CACTATTTTT CATGTTAAGA AGTTCAATAT ACAATGGTCT TTTTTGTCAA
    CTAATCATAG ATACTATAAA TACTCACATG TTGATTGACC AAGTAATACA
    TTACCTACTA GTGTTAGCTT TAAAGCCTTC AAAGAAAAGA GCGCAACTTC
    AAGAGAATTA TAAGGAACAA AAAAAAGTTA TGGAGCACAA GTAAAATGCA
    TTTTATATAT ATACACAGTA TCACCCACGG TTAATTACTG TTNAGTCTAT
    ACAAAGTATT TTCAATTATN GCAAGTAAAA TTAATACATT GTTTCACAAG
    CTATTTATTA TCCCTNAAGT CCTCAANAGA ACGCTTCCGG GATCACN

AT1G14000.1

Model type
Protein coding
Short Description
VH1-interacting kinase
Curator Summary
Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling.
Computational Description
VH1-interacting kinase (VIK); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 139285 Blast hits to 133759 proteins in 5118 species: Archae - 180; Bacteria - 15286; Metazoa - 53967; Fungi - 12530; Plants - 33711; Viruses - 527; Other Eukaryotes - 23084 (source: NCBI BLink).
Link
InterPro Scan - TAIR