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13-2821-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11110836 [Map]; Strand: w
      • AT4G20720.1 - [+] show detail - dentin sialophosphoprotein-related
        Distance: 2783; Region: intergenic
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 927; Region: intergenic
    Flanking Genome Sequence: 13-2821-1 - 5-prime edge
    GTCAGGTGTC CCTAGAAGCT GACCTCACTT CCATCGGAGC TGTCTATCGA 
    ATGTTATCCC TGCTATCCAG AAGATGCGAT CTTTAGAACT ACGAATCCGT
    CTGAATAATC CAGCTCACCA CGGGGCCGAA TT
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11110720 [Map]; Strand: w
      • AT4G20720.1 - [+] show detail - dentin sialophosphoprotein-related
        Distance: 2667; Region: intergenic
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 1043; Region: intergenic
    Flanking Genome Sequence: 13-2821-1 - 3-prime edge
    CACCTGACTC GCTGGAAAAT CCATAGATGT GCTACTAGTT TCGAGAATCG 
    TTGAGACTTG TGGGGGAATT GATCCCTAAG ATGACTAGTC TTCTTAAGAA
    AGGATTCTAT GTCAAACGAG ATTGCATCCT CTGCAGAAAC ATGGAGATAA
    TTCTCGGATG AGATATCGGA TCGAAGGGTA GTTAGATTCC CTGGAAAGCT

AT4G20720.1

Model type
Protein coding
Short Description
dentin sialophosphoprotein-related
Computational Description
dentin sialophosphoprotein-related; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT1G05090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G20725.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.2e-31 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR