Home
Mutant Lines
13-2928-1

13-2928-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 6293884 [Map]; Strand: w
  - AT1G18270.1 - [+] show detail - ketose-bisphosphate aldolase class-II family protein
    Distance: -13; Region: promoter
  - AT1G18270.2 - [+] show detail - ketose-bisphosphate aldolase class-II family protein
    Distance: -13; Region: promoter
  - AT1G18270.3 - [+] show detail - ketose-bisphosphate aldolase class-II family protein
    Distance: -13; Region: promoter
  - AT1G18280.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
    Distance: -449; Region: promoter
Flanking Genome Sequence: 13-2928-1 - 5-prime edge
```
AACAAACCAA TTTCATACGC ATCTCTCTGT CTCTCTCTCT CTATATATAT 
ATATNNGANA CTATAATNNA ACAAANAGAG ATNANTGTNA CGTTACATCG 
TGTGNGCTCT TACGNGGAAG TNCATATACA AGNGGCCGGG NGGAAATCTC 
TAACNGGGAG ATAAAATCAA TTNTAGAGAA AACTGTNGGG ATCACCNNGA 
GAGANNGGTC TGTCACGTTG TNTGGACTTG AAGCT
```
3 prime edge [+] show sequence
1. Chromosome: 1; Position: 6293807 [Map]; Strand: w
  - AT1G18270.1 - [+] show detail - ketose-bisphosphate aldolase class-II family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G18270.2 - [+] show detail - ketose-bisphosphate aldolase class-II family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G18270.3 - [+] show detail - ketose-bisphosphate aldolase class-II family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G18280.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
    Distance: -526; Region: promoter
Flanking Genome Sequence: 13-2928-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATGAC 
TGTAAATTAC ATCGGAGAAT TGTAGTGATC GGAGAAAATG AGTGGCGTGG 
TTGGGTTTGT TGGTCTTGAT TCTTTCAGCT TCGAATTAGC TTCTTCGCTT 
CTTCGTTCTG GGTTTAAGGT TCAAGCATTC GAGGTCTGTT GCNTTCTTCT 
TCTTTTTTTT TNCTTTTTTT NCNGGGNATC GGCNTGTNCT GNAAATNTCA 
NNTNGANCGG GGTNCAATTN TTCGNAATNA ANCNTNNNAA ATTNGNGGGT 
NCTGTANAAA TTNCAAAANN CNCGGCCTNT CTNTCGGNAA TNNCCAC
```

AT1G18270.1

Model type: Protein coding
Short Description: ketose-bisphosphate aldolase class-II family protein
Computational Description: ketose-bisphosphate aldolase class-II family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, valine metabolic process, glycolysis, metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Ketose-bisphosphate aldolase, class-II (InterPro:IPR000771), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), Protein of unknown function, DUF1537 (InterPro:IPR010737), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT4G20930.1); Has 34046 Blast hits to 22505 proteins in 2700 species: Archae - 264; Bacteria - 21742; Metazoa - 568; Fungi - 820; Plants - 423; Viruses - 1; Other Eukaryotes - 10228 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G18270.2

Model type: Protein coding
Short Description: ketose-bisphosphate aldolase class-II family protein
Computational Description: ketose-bisphosphate aldolase class-II family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, valine metabolic process, glycolysis, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Ketose-bisphosphate aldolase, class-II (InterPro:IPR000771), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), Protein of unknown function, DUF1537 (InterPro:IPR010737), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT4G20930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G18270.3

Model type: Protein coding
Short Description: ketose-bisphosphate aldolase class-II family protein
Computational Description: ketose-bisphosphate aldolase class-II family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, valine metabolic process, glycolysis, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Ketose-bisphosphate aldolase, class-II (InterPro:IPR000771), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), Protein of unknown function, DUF1537 (InterPro:IPR010737), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT4G20930.1).
Link: InterPro Scan - TAIR

AT1G18280.1

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT1G73560.1); Has 517 Blast hits to 515 proteins in 27 species: Archae - 0; Bacteria - 3; Metazoa - 3; Fungi - 0; Plants - 507; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR