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Mutant Lines
13-2981-1

13-2981-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 27421415 [Map]; Strand: c
  - AT1G72860.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: -637; Region: promoter
  - AT1G72870.1 - [+] show detail - Disease resistance protein (TIR-NBS class)
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 13-2981-1 - 5-prime edge
```
TTCACGGTCT CCGGATTTTC TGTCTCTTCA TGTCTCCTGA AGTCGTCGGC 
GAATTTTCCA GTTGGTCTTG TCAAATCCTC CGGATC
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 27421828 [Map]; Strand: c
- AT1G72870.1 - [+] show detail - Disease resistance protein (TIR-NBS class)
  Distance: 0; Region: intron1 (CDS)

ACCGTGAATC GCTGGAGGAA TGCACTTGAG CGATTGGAGA GCCGCACCGA 
CCGTAGATTT TGTTCACGCG ATTGGTAAAT GTTATTATGC TTACCTTATT 
ATAATAGTAT GACGTTAGGT TTTAACTTTT AAGAACTTGT AGTTACGCNT 
TAAACCTATT TTTTAATAAT TTGTTATATT GATAGGGAGG ATGATTCAAA 
GATGATCGAT GATCTAATCA TCAGCATTAC TTCTCCTATT GACAGCGGTC 
GTGAACTTGA ACAGGAATGG AGCGTTTTGG GATTGATGAG AGATATCGAT 
ACCAACTACA AACCCAAAAG CCTGTCTGCG TCCGGAGAAA GTGGACTTGG 
ACTTGAGAGA TATGCACTTG AAGACACGTC TATTATGGAC GATATATCAA 
ATGAATCGCC TTATCCCGCA TCTGACGAAT T

AT1G72860.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: stem, leaf; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT1G17600.1); Has 17128 Blast hits to 12682 proteins in 562 species: Archae - 4; Bacteria - 839; Metazoa - 1175; Fungi - 47; Plants - 14820; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G72870.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS class)
Computational Description: Disease resistance protein (TIR-NBS class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: stem, sperm cell, root; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS class) (TAIR:AT5G48780.2); Has 7950 Blast hits to 7386 proteins in 227 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 0; Plants - 7937; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR