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13-3035-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26386646 [Map]; Strand: w
      • AT5G65960.1 - [+] show detail - GTP binding
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 13-3035-1 - 5-prime edge 
    CTCTCCCATA TATGTATGAG TTCCTGAAAT GTCCTTTCCC GGTTAGAGTT 
    TCTGTTCGAC CAGGAAGTGG TAGACCGAAA CTCGACCCAG ATAAGAAATC 
    CTGGTGAGGA CATTTCATTT CCACTTGGAT TCATGTTGAT TGGGTCTTAT 
    ATTTCCTCTC AGAGTTGTCA GAAGAAGAAT CTGAATATGA ATTGGAGTAT 
    GAAGTGCTAT CAGCAGGCTC AGGTGATCCA TGGGATAATA TTGAAGAAAG 
    ATGGGTTTCT GCAAGTGAAA CGCATTCACA TGCCGATGCT GGCGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26386557 [Map]; Strand: w
      • AT5G65960.1 - [+] show detail - GTP binding
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 13-3035-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TGGAAGAAAC 
    AATTAACCTT CCCCTTGAGG TAACACAGGT TCATTTATCC TATCACCAGA 
    TTTCAGAATC ATCCCAGGCC ACATATGAGC CGAAAGAGCA CCAAATAGAC 
    GTTCAACCCC TTGAGAATCA CCATCCCGGG CNGTACGANC ACACGANGCA 
    ACTNTNTGAG CCTCATTAAT GCTAGAGAGA CGAATACGCG TATTCTCTGC 
    TCATCCATTT TCACTCACTT TTCATTCACA AGTTCAGTAG AAGCTATACA 
    AGGAGTAACC AGATTACATT GGGCATATTG CAGTCAATAT ATAATCAGAA 
    GGAAGGAGAT AGAACTTACA CTTGTCAAAA TCAGGATTAG AGGCACAAGC 
    CTCAATGAAC TCAATGTTAT TCTCAGAGCA CCACTCAAGA CATGCTCCCC 
    TGATATCTAG TGATGCATCT TCACTTCCCA ACAAGCTGCT TCCTTCAGTT 
    TCGGAGATCC CAAAGTCATC AATGTCCGAA TACAGATCTC TAGAGGGGTC 
    TGATGCCTTC AAAAGGCGCC GTCTATATTC ATCATGAGCA AGGTGATGAG 
    GGACACGATC TACTTTGTTA CCAATGCACA ACAATATATC AAAAACTGTT 
    GATGTGCAGT ATGAGAAACC CAGTCTTGAA GAGCAACAAG GGGTTGACAG 
    CTGCAAAGAA TTCGGGTTAA AAANGGTTTT TGCNNGGGAT GGNTAAGGNG 
    AGAANAATGA ANNGNGGCNT TATNATATCA TCANNAATGN NAAACCTTNN 
    NTNAANTCGA

AT5G65960.1

Model type
Protein coding
Short Description
GTP binding
Computational Description
GTP binding; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial Rho-like (InterPro:IPR013684), Alpha/gamma-adaptin-binding protein p34 (InterPro:IPR019341); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR