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13-3112-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6704609 [Map]; Strand: w
      • AT4G10925.3 - [+] show detail - Nuclear transport factor 2 (NTF2) family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT4G10925.1 - [+] show detail - Nuclear transport factor 2 (NTF2) family protein
        Distance: -6; Region: promoter
      • AT4G10925.2 - [+] show detail - Nuclear transport factor 2 (NTF2) family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-3112-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTACGGAGTT GGAGACAAAA GAGCTTCTGA ATCTCTCTCT CTTCTGCGTC 
    TCGCCAAATT TATTTCCCGA TTCAATTTGT AGGGTTTCTG CAGAAGAAGG 
    AAACCACCAT TAAACCCTAA GTACGTCACC TTTCAAGCTC CTTCTTCTGT 
    AGGTTTTTTT TGTTCTTCTG ATTCATGTTT ACAAAGTTTT TTTTATGTCT 
    CTTCTAACTT CTTCTCCTTC TCGCCGCGTA ATCAGTCCTT ATTGTTCTTC 
    ATAATCGCAG TACCAATCGC AATCGTTTTC TTCCTCTCTC GATCTGTTCC 
    TCGGACGAGA AAACTGGACA ACAAACCTAT GCCGTCGACG CCGCTGGCTA 
    ACGGNGGTAC GCCTCCTATG GGTGGCGGAN AGAGAACNAC GGTTACAACT 
    TCCACGGNGG CGGATGATAA GCCTGGAGTT TCNATGATGG AGCAGTTGGT 
    TCCGGAAATT ACNACACACN CGCTTAGTTA CTTGGATTAT CCCAGTCTCT 
    GTCGCTTATC CATGACTAAT TCCTTGATGA GGAAAGCTGC TAATGATGAT 
    AATGCTTGGA AAGCTCTTTA TCACAAGGTA ATTAGATTCA CTAATCACTC 
    ATTTGTATTA GCTTTGTGTA TTGGAAATTC ANAAATGATT CTAGGTTAAA 
    AGATGTGTAT TCTTAGCAGT TTCTGGATTA GTGNGTGTTT CCGNGAATGG 
    GGCTATTTGG TNAANGCTTC TCTTACTTTT TCTCATGNGT AAGGATTTAC 
    TCTGGACAAN ATGGTTAN

AT4G10925.1

Model type
Protein coding
Short Description
Nuclear transport factor 2 (NTF2) family protein
Computational Description
Nuclear transport factor 2 (NTF2) family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G23960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G10925.2

Model type
Protein coding
Short Description
Nuclear transport factor 2 (NTF2) family protein
Computational Description
Nuclear transport factor 2 (NTF2) family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G23960.1); Has 202 Blast hits to 202 proteins in 57 species: Archae - 0; Bacteria - 78; Metazoa - 1; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G10925.3

Model type
Protein coding
Short Description
Nuclear transport factor 2 (NTF2) family protein
Computational Description
Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G23960.1).
Link
InterPro Scan - TAIR