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13-3152-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30351260 [Map]; Strand: c
      • AT1G80760.1 - [+] show detail - NOD26-like intrinsic protein 6;1
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-3152-1 - 3-prime edge 
    ACGGAGGCCA TCACCTGAGC TCCGATATAC ACCGGCACCT AACATAAATT 
    TAGACACCAA CATTATTATT TTTATAACAA TTATATAGAA CCCCTTTTAT 
    ATGATCAGAT TTTATATATA CTTTTATTAC CCATGTTAAA ATTCAATTCA 
    TAATACAACA TGCATGTGCA TGTCTATAGA TTTCATGTGG TTCTCTCAGT 
    AACATCCAAA AATGTGTTAA AACAAATAAG ATTAAAGTAC NTGACGTGTT 
    TCCAAGGGAA GTGTTTGAGA GCAGCAAAGG CAATGGTTAC AGCCGGATTG 
    AGATGTGCCC CGGAGATGTG ACCGGTCGAT AATATAACGA TCATAACCGC 
    CAAACCAGCC GAGGCGGCGC AACCAATAAG CGTCTCAGCT CCATCTGTCT 
    TCTGGTTCAC GATCGCCGTC GCTGTTCCGG CGAATATCAG GATCAATGTC 
    CCAACAAACT CTGCTCCCAA CTTTACAAGT ACATATATGT ATTGGTTCAA 
    TGCTCAGTGA ATTGGAAACA TGATTTATAT GGAGTGTACT TGTAATGAGA 
    ATGTGTACAT ATGTACCTTG CGGTAGAGGG AAACGTTAGG GGGAGGGAGA 
    GAGCAAGTGA CCGGAGGGAG TCTTCCATCT TCAAGAGCCC ATTCATTGTC 
    AACACTGAAA CATTTGCAGC TTTTGAGAAG TGACTTTGGT GTGTATCTAC 
    CATTGNGTCC ATTCCTCTTC CCTTCGAATC CTCCAAAG

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30351144 [Map]; Strand: c
      • AT1G80760.1 - [+] show detail - NOD26-like intrinsic protein 6;1
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-3152-1 - 5-prime edge 
    GCCTCCGTGA GTGCGGCGTT TGCACTGAAA GCAGTGTTTG AACCAACGAT 
    GAGCAGGTGG CCGTGACGGT GCCGACGGTG GGTCTCAGCC AAGCT

AT1G80760.1

Model type
Protein coding
Short Description
NOD26-like intrinsic protein 6;1
Curator Summary
Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.
Computational Description
NOD26-like intrinsic protein 6;1 (NIP6;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 5;1 (TAIR:AT4G10380.1); Has 10266 Blast hits to 10221 proteins in 2131 species: Archae - 103; Bacteria - 5136; Metazoa - 1354; Fungi - 440; Plants - 2031; Viruses - 2; Other Eukaryotes - 1200 (source: NCBI BLink).
Link
InterPro Scan - TAIR