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13-3154-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
vascular leaf (PO:0009025)
  • variegated (PATO:0000335)
    (Leaves::variegated leaves)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11241615 [Map]; Strand: c
      • AT4G21060.1 - [+] show detail - Galactosyltransferase family protein
        Distance: 0; Region: intron1 (CDS)
      • AT4G21060.2 - [+] show detail - Galactosyltransferase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-3154-1 - 3-prime edge 
    CTAATAGCCC TAGATTCAAG GAGATAAAAC TGCTCAAATC AGGTGGAGAT 
    TTGCTCTGCT TCATTGGTTT TTTGTTTTGT TTGAGTTAGT GACTTTATCT 
    ATTTCTTCTT CGCCAAAAGA CGAGATTTTT AAAACAAATT TCGTCTTTTT 
    CAAATTCTCG TGTCAAATTG AGACATTTGG GTTGCTTTGA TTGGATTTCG 
    TAGACTCTAT TGATCTTCAG ATCGTGTCGA GATTTAGCTG CTATTGTGGG 
    GTTTAGAATC CTTCTCTTTA CCGGATTCTC AGGTTATAAA TCTCCTTTAC 
    TTCTTTCAAT GAAGTTGTTC GATGAATTGG CTACATTTTA GGTACTCCAG 
    GTGCAGTTTT GTGGCACTAA TTCGTCTTGT GAATCAACAA GTCGAGTGAT 
    TTTGATTGTG GAAGGTAGTA ATTTTTAGTT GACCCTCACA ATGAAAAGAG 
    TAAAAAGCGA ATCTTTTAGA GGAGTTTATA GTTCTAGGAG GTTCAAGTTG 
    TCACATTTCT TACTAGCTAT AGCAGGGTTT TACTTGGTTT TCTTAGCTTT 
    TAAGTTCCCA CATTTCATTG AGATGGTTGC TATGTTGAGT GGTGATACTG 
    GTTTAGATGG GGCATTAAGT GATACTAGTT TAGATGTTAG TTTAAGCGGA 
    TCGTTACGTA ATGACATGTT GAATAGGAAG CTAGAAGATG AAGATCATCA 
    AAGTGGGCCT TCTACTACTC ANAAGGTGCA CCAGAAGANA AGATTAATGG 
    ATCTAACAGA TT

AT4G21060.1

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT5G62620.1); Has 2332 Blast hits to 2297 proteins in 115 species: Archae - 0; Bacteria - 6; Metazoa - 1696; Fungi - 8; Plants - 568; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G21060.2

Model type
Protein coding
Short Description
Galactosyltransferase family protein
Computational Description
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT5G62620.1); Has 2343 Blast hits to 2302 proteins in 116 species: Archae - 0; Bacteria - 6; Metazoa - 1700; Fungi - 8; Plants - 556; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
Link
InterPro Scan - TAIR