1. Home
  2. Mutant Lines
  3. 13-3246-1

13-3246-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2802128 [Map]; Strand: c
      • AT3G09140.1 - [+] show detail - Protein of unknown function (DUF674)
        Distance: 0; Region: exon1 (CDS)
      • AT3G09140.2 - [+] show detail - Protein of unknown function (DUF674)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-3246-1 - 5-prime edge 
    GTGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAA GCTCAGTGAA ATACTTCTTC ATGTCGGTTT 
    CAGTGAGGTA TTTTTTACTG TATCATCTTA CGTTGGTCTT CGTAGTTTGA 
    ATATATATGT TTTGTTGAGT GTTTGTTTGT GTCATCAACA GGTACNTGAC 
    TTTTGCTTGG AATGTTTCTT TACTTCGGAC CTTCCTTTAA CCGACACTTT 
    TCTGAAGAAG CAAAGCTCAT TGCAAATGAT CAGATCTCGT ATACCTCTAA 
    GTCCAACTTT GCAAGGATCT GGAGATGGAG CAGTACCAGG CCAAACCATA 
    ACTTTTAAAG CATTTGTTAG AAAACCGAAC ATCAAGATTC TCTGTGTTGA 
    ATGTGGAGCA GACTTCATTG ATCTTCTTTT CACTTTTCTA GCTTTGCCAC 
    TTGAATCTGT CTGGAACATC TCTGCAGGGA ATATCAGTTT AGGTTGTATT 
    GGAAACTTAT TCAGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2802163 [Map]; Strand: c
      • AT3G09140.1 - [+] show detail - Protein of unknown function (DUF674)
        Distance: 0; Region: exon1 (CDS)
      • AT3G09140.2 - [+] show detail - Protein of unknown function (DUF674)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-3246-1 - 3-prime edge 
    NTTNAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCTTGA 
    GAGTATTCAA AACATTATCC ATAGAGCTCG CCTCCACTTT CAGATCATCT 
    GTTATAATGA AAGAAGAAGC T

AT3G09140.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF674)
Computational Description
Protein of unknown function (DUF674); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF674 (InterPro:IPR007750); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF674) (TAIR:AT5G01150.1); Has 424 Blast hits to 257 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 422; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09140.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF674)
Computational Description
Protein of unknown function (DUF674); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF674 (InterPro:IPR007750); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF674) (TAIR:AT5G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR