Home
Mutant Lines
13-3250-1

13-3250-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 3395446 [Map]; Strand: c
- AT1G10350.1 - [+] show detail - DNAJ heat shock family protein
  Distance: -391; Region: promoter

CTTAGGTGAT GTTCTCACCA AACTTTAACT TGGTATCCAG TCTGTGCATT 
TCCAAGATTG ATATACACAA TTACTAATTT AATACTCTAA TTCTCTAGAT 
TAATATAAGT GGTTTGGTCG ATCGGTTTAA TTATTGTATC TGTTTTTTTT 
GTCGGCTAAA TAAAGTAATA ATTCTTTCTT GTTTAACTTT AAGTACGAAA 
CTAAAAATGT TTGTTTCTGT TTCATTAATT AAAAAAATAC ATCCAAATTT 
GTCCCAATAT GTAACTTCTG ATTAAGCAAT CAANAGAATT TTTGTCTAAT 
AAAAAAAGAG GGGGATATGA AAATGATAGT GATCAAATTT TTTACCATTC 
ACCACAAAGA TGAAGTTAAA GATAAAGTAA TAATAAATGC CACGTGGCTC 
CATTAAAAAC AATTTTCTCA TTCTCCTTTG TCATGTTCTT CTTCTACCTT 
ACACGCACTC CACTCTTCGT TTCCTTTTTC TCTCTTCCAA TTTCAGATTT 
TACTGGCAAA ATATCTCGAA TCCGATTCCT TTTTTCTCTT CTGCAATCTC 
TTTGAAATCT CAAGCT

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 3395562 [Map]; Strand: c
  - AT1G10350.1 - [+] show detail - DNAJ heat shock family protein
    Distance: -507; Region: promoter
  - AT1G10360.1 - [+] show detail - glutathione S-transferase TAU 18
    Distance: 0; Region: exon2 (3UTR)
Flanking Genome Sequence: 13-3250-1 - 3-prime edge
```
CACCTAAGTG ATTTTGGTAA TTCACAAAAA GAAAGGTTAT GGCAAATCAC 
AAAGAGCATG GTTTCGATAA TCAATGTTTA TATGTTTGGT ACACTCATGT 
AAAATTTGAT CTGAGGTAAT ATGGATTACA ATATTTTCAT AACTCCAAAA 
TTATGAACGA ATATGCAAAA GACATAAAAA AAATATTTGG CTGTGCTTAT 
TATATAACTT ACATCCTAGT AATCCAGTTT ATGCTTGCGG CTTAGGAAAG 
AGCTTCCTTG CGAATT
```

AT1G10350.1

Model type: Protein coding
Short Description: DNAJ heat shock family protein
Computational Description: DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G59725.1); Has 27964 Blast hits to 27510 proteins in 3469 species: Archae - 176; Bacteria - 10323; Metazoa - 4622; Fungi - 2603; Plants - 2812; Viruses - 18; Other Eukaryotes - 7410 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G10360.1

Model type: Protein coding
Short Description: glutathione S-transferase TAU 18
Curator Summary: Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational Description: glutathione S-transferase TAU 18 (GSTU18); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT1G10370.1); Has 5056 Blast hits to 5041 proteins in 1030 species: Archae - 0; Bacteria - 2429; Metazoa - 208; Fungi - 116; Plants - 1907; Viruses - 0; Other Eukaryotes - 396 (source: NCBI BLink).
Link: InterPro Scan - TAIR