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13-3252-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26311680 [Map]; Strand: c
      • AT1G69860.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 13-3252-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAC 
    ACATTGAAAA CATTACAAAA CAAAAAGGAG GTATCTCGTT ACTACAAAAA 
    GTCGGCATTG GGAATATTTT CTCCATCTCG ACGATGCTCA TATCCGGTAT 
    TGTGGAGCGA AGGAGAAGAG ATTTATCGCT TAATGGAGTA AGCATGTCGG 
    TTTTCTGGCT AACCCCGCAA CAAGTACTAA TGGGATTTTA TCAAGTCTTC 
    ACGATTGTTG GTCTCACCGA GTTCTTCAAC AAACAAGTTC CAATCAACAT 
    GAGAAGCATT GGGAACTCGT TGCTTTACTT AGGTTTGTCT CTAGCCAGTT 
    ATCTAAGCAG TGCGATGGTG AGCATTGTTC ATAGTGTGAC TGCTCGTGGA 
    GGACGACAGA GTTGGCTAAC GGATGATATT GACAAAAGCA AGTTGGATTG 
    TTTCTATTAC TTTATTGCCG CTTTAAGCAC TCTTAATTTC ATCTTCTTCT 
    TCTGGTGTGC TCGAAGGTAT CGTTACAGAA ACTATAGTAA TGAACAATAA 
    TTAGTTTGAC ATGTTGGAAA TGAGGAGTGG AGAATCTGCA CAGTTTTAAA 
    ACAATAATTA GTTTGACATT TTTCAAAACT TCANATTTTT ATTTTTAGTT 
    ACATGTTGTA AGAATAAACA CTCTAATTTG TATAGTCTTG TAAACAAAAT 
    TANATGTGCT CCCNAAAGTG ACAACTTTGA AAGTCTTTGA TTATTTGAAA 
    ACCACCC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26412959 [Map]; Strand: w
      • AT1G70140.1 - [+] show detail - formin 8
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-3252-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTC CATCACTTTC CTCTCTTCAC CTTTCGCTAT 
    TTTCACCTCT TCCTCTACCG AATCAAGAAA CGTCATCATC TTCTTCACAA 
    ACCTCCCTCC TTCTCCATCT TCACATTCTC CAATCACCGT TTTCGCGTCT 
    TTCGCCCTAA CCGCAAGAGC AGAGCAAGTT GCAACAACCG TGTCATAGTC 
    CACACAAGCA GCTTTCTTCA CGTTTGAAAA CTCAGAGCTC AATCCGTTAT 
    CCTCCAACAA CTGGTAAACC AAGCT

AT1G69860.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.7 (TAIR:AT1G69870.1); Has 5388 Blast hits to 5286 proteins in 980 species: Archae - 0; Bacteria - 2151; Metazoa - 479; Fungi - 383; Plants - 2163; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G70140.1

Model type
Protein coding
Short Description
formin 8
Curator Summary
Encodes a group I formin. Binds to F-actin barbed ends. Has severing actin filaments activity. Binds profilin. Involved in the initiation and tip growth of root hairs through regulation of actin cytoskeleton.
Computational Description
formin 8 (FH8); FUNCTIONS IN: actin binding, profilin binding, actin filament binding; INVOLVED IN: actin nucleation, cell tip growth; LOCATED IN: cell-cell junction, plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homologue 4 (TAIR:AT1G24150.1); Has 22376 Blast hits to 12386 proteins in 831 species: Archae - 31; Bacteria - 2621; Metazoa - 7710; Fungi - 2231; Plants - 6132; Viruses - 1038; Other Eukaryotes - 2613 (source: NCBI BLink).
Link
InterPro Scan - TAIR