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13-3273-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 13951607 [Map]; Strand: w
      • AT5G35777.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 13-3273-1 - 3-prime edge
    AACATCACCA GCTGCATATG GAAAAACATC TTCCCGGAAA ATAACAACAC 
    GAGATATGAA AAATTCATTT TTCTCCAAAT CATAAACCTT CCATCCCTTC
    TTTCCATAAG CATAACCAAC AAAAATGCAA AGTCTACTTC TTTCTCCAAA
    TTTATCTTTG TCTCGAGCCA TACGATGAAC ATAACAAGCT GAACCAAACA
    CTCGGAGTTG ATCGTAGGGA GGCTTGCTGT TGTGTAGAAT TTCATATGGG
    GAACGACCAT TGTTAACTGA AAAGGGTGTG CAATTGATGA GATATGCTGC
    AGTAAGAATT GCTTCTCCCC AAAACTTGAT AGGTAAGCTA GCTTGGAACA
    ACAATGCCCT AGCAACATTA AGAATGTGGC GATGTTTTCT CTCAACTCTA
    CCATTCTGCT GTGGCGTCGC AACACAAGAT GTTTGATGTA TGATACCCTG
    CTGCTTAAAG TGAGAAGAGA GGCACATAAA TTCAGTCCCG TTGTCACTCC
    TAACGATTTT TATTGTTTTT CCAAATTGTT TCTCTGCATA TGCAATGAAG
    TTTGTCAACA CATTTCGTAC CTCTGACTTT TGAAGAAGCA GATATGTCCA
    CATCGCTCTT GAATAATCGT CAACAATAGT CAAAGAAGTA AACTGCTCCA
    CATGAAGATG GAACCCGATA AGGCCCCCAA ACATCGCAAT GTATTAAAGA
    AAAACAATCG TTTGCTTTAT T

AT5G35777.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 2.0e-67 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)
Link
InterPro Scan - TAIR