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13-3303-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 7177835 [Map]; Strand: w
      • AT5G21105.1 - [+] show detail - Plant L-ascorbate oxidase
        Distance: 0; Region: exon5 (3UTR)
      • AT5G21105.3 - [+] show detail - Plant L-ascorbate oxidase
        Distance: 0; Region: exon6 (3UTR)
      • AT5G21105.2 - [+] show detail - Plant L-ascorbate oxidase
        Distance: 0; Region: exon2 (3UTR)
      • AT5G21110.1 - [+] show detail - unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bac...
        Distance: -780; Region: promoter
    Flanking Genome Sequence: 13-3303-1 - 3-prime edge 
    TATTNAGGAC TATTTTATAC TTCTGTATCT CTATTTTTTT CTTTTGTTAA 
    ATCTAAAACT CAAATGTACT TATACAAACT TGTATTTGAA CAATACCTTT 
    CCAAATAACA ATTATTATAC AACATCACTT TGTATATTTT CACAAAACGA 
    AAAATAGCAA ACCCAAATAT TCTCACAACT ACAGATAAAA ATTATCTTAA 
    GTGAAGCAAA AGTTTGCCGG TGTAGTTTAA CTAAATTTGA TATTTTTTCT 
    TCGATTTGTC CGATTCCACT GATAAAATAA ATCACGATGA AGCTCTATCC 
    ACCAAGTCAA TTCGGCTGGA AAGAACTCGC TGAACTAATC CCAATCAAAA 
    TAACCGATAT AACCAACTA

AT5G21105.1

Model type
Protein coding
Short Description
Plant L-ascorbate oxidase
Computational Description
Plant L-ascorbate oxidase; FUNCTIONS IN: oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117), L-ascorbate oxidase, plants (InterPro:IPR017760); BEST Arabidopsis thaliana protein match is: Plant L-ascorbate oxidase (TAIR:AT5G21100.1); Has 10302 Blast hits to 9343 proteins in 1616 species: Archae - 73; Bacteria - 4566; Metazoa - 590; Fungi - 3309; Plants - 1352; Viruses - 0; Other Eukaryotes - 412 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G21105.2

Model type
Protein coding
Short Description
Plant L-ascorbate oxidase
Computational Description
Plant L-ascorbate oxidase; FUNCTIONS IN: oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, copper-binding site (InterPro:IPR002355), L-ascorbate oxidase, plants (InterPro:IPR017760), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Plant L-ascorbate oxidase (TAIR:AT5G21100.1); Has 4653 Blast hits to 4513 proteins in 833 species: Archae - 6; Bacteria - 1324; Metazoa - 438; Fungi - 1506; Plants - 1255; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G21105.3

Model type
Protein coding
Short Description
Plant L-ascorbate oxidase
Computational Description
Plant L-ascorbate oxidase; FUNCTIONS IN: oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), L-ascorbate oxidase, plants (InterPro:IPR017760), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Plant L-ascorbate oxidase (TAIR:AT5G21100.1).
Link
InterPro Scan - TAIR

AT5G21110.1

Model type
Protein coding
Computational Description
unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR