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13-3348-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 461655 [Map]; Strand: c
      • AT1G02310.1 - [+] show detail - Glycosyl hydrolase superfamily protein
        Distance: -959; Region: promoter
      • AT1G02320.1 - [+] show detail - unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BL...
        Distance: -173; Region: promoter
    Flanking Genome Sequence: 13-3348-1 - 3-prime edge 
    ATGTGAAATG AGATCTAACT TGGGCCATTC ATTCTTGTTC TCAAGTTTTA 
    CTTCACAATA TTGGGCCCTT GATAAAGCCC ATATACTTGA TATGGTTTGA 
    CTCTATGGAC TTACATAACT AGCGCTCTGG GTCTTCAAAT ACACCTCATT 
    TTTCTTTGGG TGTTTTTAGG TGAAATACGA AACCTAGGGG TTCATTTAGC 
    AATTTTCATC ATAAAGGGAA AAAGACATGT TTATATTTTC CAAGTATGGA 
    TCAAAGGCTC TAACAGCAAC AAATGGGAAA CAATGTCAAG AAACTGAGGA 
    CCTAATCTAT CTGGCAAAGC CTTTTACTTA CCTTAATGGC CAAAGTCTTT 
    CCATTCAAAA TCCAAACCAG TAATGGCAAA ATCAAGACAC TACTCAATGT 
    CGTTCCTTCG AATTGGCAGT TTGGTTAGAG CTTTGAGAGC AACTTAAACT 
    TCTGAAAGCA CACTTTTACT ATGAACTATG TAAACGAAGA TTTGTTTTCT 
    TTTAATGAAA TGTTACAGAA TT

AT1G02310.1

Model type
Protein coding
Short Description
Glycosyl hydrolase superfamily protein
Computational Description
Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT5G66460.1); Has 762 Blast hits to 752 proteins in 193 species: Archae - 9; Bacteria - 223; Metazoa - 4; Fungi - 190; Plants - 306; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02320.1

Model type
Protein coding
Computational Description
unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).
Link
InterPro Scan - TAIR