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13-3420-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5608743 [Map]; Strand: c
      • AT1G16410.1 - [+] show detail - cytochrome p450 79f1
        Distance: -64; Region: promoter
      • AT1G16410.2 - [+] show detail - cytochrome p450 79f1
        Distance: -64; Region: promoter
    Flanking Genome Sequence: 13-3420-1 - 5-prime edge
    CTAGCGATAT CTGGAAAGTG TTTGTTGTGT GGATTATTTA TAGAATCGAT 
    ATCATGCATG TGATGCTCAC GTAGGGTTTG GGCTTTTGGG TAGGTACTAC
    GGTAATCACN GTTTATATAT ATTTTATATC TAGTTTGATG AGTAGCGATA
    GTAAAAGCTC TATAGATTTT TTAATGTCTA CTACGTCTAT ACTTCTATTT
    CAAGGGATTT AGTTTTGTCA CAAAAACAGT TTGTTTTGTA TTTTGAATGT
    AAACGTGTTT TAGCCGTAAA AAAAAANANA GTAAAATTTT TAAAATTAAT
    TATCCATAAA AAATATATTG AATTAACAAA ATAAATTTAT CCATATAATT
    CCTTTCAATT TTATTTGCTA AATCCACAAA ACTCATATTA CAAACTTGAA
    CACTTAATTC AAATATATAT GTATATGTNA CTGTAAAGNG GTGTTGGGAT
    ATATGTTTAA TCACTAATAT ACACGACTAT NTATATTCNA TATTTCAATA
    TTGNAATCTG GATAAGGTTA ATGGAACATG AAANATCCCA AATACAAGGG
    GGATTTTCCC TCCAAAGGGA AAAAAAGCGA ATCACAACAT TTCNNCNTNT
    NACTATGTNT NTNAACATGC NTNAAAAATT NACTNTACAC ANNGNANCCN
    NGGANTGGNA GGNATANCCA NNNNGGGCNN GNNANCNNNG GCCCCNAAA

AT1G16410.1

Model type
Protein coding
Short Description
cytochrome p450 79f1
Curator Summary
member of CYP79F
Computational Description
cytochrome p450 79f1 (CYP79F1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily F, polypeptide 2 (TAIR:AT1G16400.1); Has 27252 Blast hits to 27093 proteins in 1494 species: Archae - 44; Bacteria - 2170; Metazoa - 10673; Fungi - 5027; Plants - 8510; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G16410.2

Model type
Protein coding
Short Description
cytochrome p450 79f1
Curator Summary
member of CYP79F
Computational Description
cytochrome p450 79f1 (CYP79F1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily F, polypeptide 2 (TAIR:AT1G16400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR