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13-3456-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4633094 [Map]; Strand: w
      • AT1G13520.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-3456-1 - 5-prime edge 
    TCTGTAAGTC ACAGTCAGCT TTGCGTTCTG TGGGAACGGT AAGCCTTTGA 
    GTTCACCATC GTAGCAATTT CCAAAGCAAC AAGTCGGTTT TGACTCTTCG 
    TCTTGAATCA CAAGTACGCC GGAGTTTGGA CCTTCCGGCA ACGATCGTGT 
    CAAGTCCGAC GAGTTTCTCT GGTATTCGGA GAGATGCCTT GTAACATACA 
    TCTTGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4632978 [Map]; Strand: w
      • AT1G13520.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-3456-1 - 3-prime edge 
    CTTACAGAAC CGGAACTGGT AATGACAGGC GCAGTTACCA TGACCAGGTT 
    CTGTTCATTC CGGTTCTTGA TCAGCCTTAT TATTCGAACC GTTATTATGT 
    CATTAAACGA CGTGGGAAGC AATCAGGGTA TGGCCAAAAA TCTTAATTAC 
    TTTCTTGACT TTGTTTTGTT TTTTTGAGGT TTTAATCAAT TTATGTCATG 
    CATGGTTCGA GATACTTGCT TTTGGGTTTG GTTTTCTTGG GATGGTTTCG 
    GTTTGACCGG ATTGGCCACC CCTTTTGACC TGACTTGCAC AAATGGTATT 
    CATTAAAAAA AAACTAATTT TGGATTGCAN AGGAGCTTCG GCGAGTGCAA 
    AGGAANAANA CAGAGTCCCC TGCTGCTTTT GCTTCAGCTA TGTTCCTGAA 
    GTTAAGCCAC AAGAAGCAGA TCCTTATGAT ATATATCAAC AGTTCGAGGT 
    CCATCAACGT AAACCATCAT CAGGCTATTA CACTGCCACT TCAGTTGCTC 
    CTAATGGGAT ACCACCANAG TTCCTTAANA NAAAGTACTG GACCGTTGAG 
    TATTCNAATT ACCANCCCGG GCCGTNNACC ACNCGGNCCC TTNTA

AT1G13520.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1262)
Computational Description
Protein of unknown function (DUF1262); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13480.1); Has 107 Blast hits to 100 proteins in 12 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR