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13-3533-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 229730 [Map]; Strand: w
      • AT1G01630.1 - [+] show detail - Sec14p-like phosphatidylinositol transfer family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-3533-1 - 5-prime edge 
    TTCCAAAGGC AACCCTGACG AGTTCAAGCG TTTTGTTGTC TACACGCTCG 
    AGAAGATTTG TGCTAGGTGA ATAATAATAA TATTACTACA TACATTAAGT 
    TAGTGTGGGT ATATAAGAAA CCATTTATGC TAATGCTCTT TTTTTGTTTG 
    TTTGAATGTT GTCATGTTAG AATGCCGAGA GGTCAAGAGA AATTCGTAGC 
    AATTGGAGAT CTGCAAGGCT GGGGATATTC TAATTGTGAC ATCCGTGGCT 
    ACCTTGCTGC TCTTTCCACT TTGCAGGTTA CTTCCTTTAA TTCGCCTATC 
    ATATCTTTTG AAACAAACAT TTAGGTTTTT AGCAATTATC ACTAATAAAG 
    GAAAATATTG CTAATAATCC ACTTAACTCC AAATATAGAG AATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 229614 [Map]; Strand: w
      • AT1G01630.1 - [+] show detail - Sec14p-like phosphatidylinositol transfer family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-3533-1 - 3-prime edge 
    CTTTGGAAGG GTTATGTCTG TTCCCAATGG CAACAGCGAT AGGTCGACCC 
    ATCTTGTCAT GACCTTGCAT ACACATCTTG TTATGCGATA GATCATTTGC 
    AATCTCTGCT TCTGGTATGT GCCCCTTTGG GAGCATGCTT CTCTTCCAAG 
    TCAGGTAATT TAGAAACATC GTTGAAGCCT TTTCAATGTC CAGGTCACGC 
    GCTCTCAGAA ACCTCCTTAT CATCAGATCA TCCACCTCCT GCAAATCCAA 
    ATCATTAGGG CTTTTATCAA ATCAATACTT TTCTGGTTGA ATT

AT1G01630.1

Model type
Protein coding
Short Description
Sec14p-like phosphatidylinositol transfer family protein
Computational Description
Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G14820.3); Has 3015 Blast hits to 3010 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 1124; Fungi - 666; Plants - 866; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink).
Link
InterPro Scan - TAIR