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Mutant Lines
13-3719-1

13-3719-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 3526315 [Map]; Strand: c
- AT1G10650.1 - [+] show detail - SBP (S-ribonuclease binding protein) family protein
  Distance: 0; Region: exon1 (5UTR)
- AT1G10650.2 - [+] show detail - SBP (S-ribonuclease binding protein) family protein
  Distance: 0; Region: exon1 (5UTR)

ATTTAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATAG 
TATGGAGCGG GACAGTGGTG GAAGAAGTGG GGGAAGTTGG GTTGGCGATT 
TTCGATATGA AATTATTAAT ACGTTTTTTT TTTTTNANNC TTNCAAANNA 
AAAAAAACNT TTGAAAAAAA AANCAAAAAA NGGNNNNTNN NAANNNNAAC 
CCCCNACCAA AACCCGNGGG GGGGCCTTNC NCTTTTTTTT TTTCNNNANT 
NGGNTTTTTN TTTTTNNTTC CCCCNCCTTT NNNTNNTNCC CTTTTTTTTT 
TTNNTTTTGG GTTCCCTTTT TTTTNGTCCC AANCCCCNNA AANTTNTGGG 
TTGNCCNNNC CCTTTTTNAN TNAAAAANNN NNANTTTTNG NATTNGNAAA 
NAAANACCCA ANTTTTAAAA NNATTTTTNN TNANTTTTTT NCCNAAANCN 
TCCCNNANNA NNTTTNCCNA AATNCNNNTT NGANAAATTT NTTTNNCTAN 
NCCTTTTTNG GNGGGTTTTT TNCCCCCCNT NAAAATTTTN NANNAAAANT 
NGGNAAATTT TTTTTTNAAA NCNNNTTTTN CCCCNCCANN GTTTTNANTN 
AANNNCCTNG NNAAANTCCC TNTTTNGGGG TTNTTTTTTA AAAAATTNTT 
TNNCCCAANC CAAAAATTAA AAANNCCNAA NTGGGGNATT TNAAAANNGG 
GAAATTTTTT TAATTTNCNN NGGGGAANTT NTTNAANCCC CNNNTNCNNN 
NANCCCNNTN TTTTTTTTTT NNCCCCCNTT TTNT

5 prime edge [+] show sequence

Chromosome: 1; Position: 3526316 [Map]; Strand: c
- AT1G10650.1 - [+] show detail - SBP (S-ribonuclease binding protein) family protein
  Distance: 0; Region: exon1 (5UTR)
- AT1G10650.2 - [+] show detail - SBP (S-ribonuclease binding protein) family protein
  Distance: 0; Region: exon1 (5UTR)

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCT CCATCGCACC CGCTTTGCTT ACCACATCCA 
TCATTCATTC ATTTCCTTTC TTTCTTTCTT CTTCTTCCGT TTCTTTTGCC 
TCTTTCTTTT GTCTTCTTCC TTCTATTTTT TTGTGGCTTT AAATTTATTG 
GGTTTTGTTG TTCTTCTTCT TCTATAGCCG TTTCATCTTC ACAATAGCAT 
CTTCTTCTTT TTTTCCCTGT CAAGATCCTG AATCATCGGT TNGTCTCTCT 
CGATTTCTTA ACCTCTTTTT TTTCTTTCTA CAAAAATAAT AATTANGGGC 
TATATAAAAA AGTATTTCTT TCTTTNAGTN GANGATGATT TTNGTTTNCC 
TAATATATAT ATATGCNGGA TCTANAAGGA AACTAGAGTN GGGGAAATNA 
NATAAAATCT NGGGANAAAT CTCTNAAAAA GGNANAATTN TNATTNCCCT 
CTTCTTCTTN TGGAAANNAT TTTTTNCCTT TNGGGGGAAA ATNGCAATAT 
TTTTAGGGTT TTCNGTNNCN GGGTNANGAC TNGNNCTTNG AACTNNGGGN 
ATCTTNCCAT GNNCCTANAA ATNNGCCNTA TATCANNANN NGNNAANNNG 
NATATNNATA NGGAACTNNG ACTTNNNAAC NAAAAAAAAA ANNTNTTTNG 
NNNCCCCNGN NNNNNAAAAA ANANNNNNAA AAAANNTNNN GGNNANGGNA 
AAAANGANAA NANNNNNNAA ANGNNNNNNN NNAAAAAAAA AA

AT1G10650.1

Model type: Protein coding
Short Description: SBP (S-ribonuclease binding protein) family protein
Computational Description: SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT1G60610.3); Has 1212 Blast hits to 1212 proteins in 167 species: Archae - 0; Bacteria - 2; Metazoa - 524; Fungi - 0; Plants - 416; Viruses - 105; Other Eukaryotes - 165 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G10650.2

Model type: Protein coding
Short Description: SBP (S-ribonuclease binding protein) family protein
Computational Description: SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT1G60610.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR