1. Home
  2. Mutant Lines
  3. 13-3791-1

13-3791-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3644041 [Map]; Strand: w
      • AT5G11420.1 - [+] show detail - Protein of unknown function, DUF642
        Distance: -506; Region: promoter
    Flanking Genome Sequence: 13-3791-1 - 5-prime edge 
    GGTCANGCAA CGCACCCCAN GNNCAGACAT CCNNTGNGNG CGNGNATCAC 
    CATCCGNGGN NNTACANCAN NCGTGCCTNA NGATATATGA TCAACACAAA 
    CTTTTGTTAA TGCTCTTTTA ATTAACACAT ATAACATGCA AAAGTTGTCT 
    AATGTTTTAT TTTGTCTACG ATCATGCAAA AGAAATACTA GCAGTATAAG 
    TTTCAAAAAT AAAAGGAGAT TCGGCGTTAA CATTAACAAG CACTAAATGC 
    AAATGTATGC ATAGTAACAA CTAACAACGT CGAAATTTGT CATTAATATA 
    TATGTTAACT ATTAAAGCCA TATTTATAAA CATAATTTGG TATGTCCAAA 
    AGGTGTTTTG TACTACTGGC CTTATAATTT GTTTTTGGTT TAAGGATGAT 
    AATAATCAGA CGGCAGACAA AATCATTGAG AAAAGAAAGG AGTTTCCAGG 
    AATAACCCTC TCTGATCGAT CTTCTGAAAT CTTAGCTAAA CCCCAAAAGA 
    GTGAGTCACG GCCCCACGTG GATACGTGAT CACATCAGTG GCATAAATCC 
    GTAAATTGTA GTAAAATCTA AAGGTATTTT CCAAGTTAGA CTTCCATATA 
    AGCTATTGCT GGCTCCTNTC CCAATTTTNC CATAATTTAC TAAATATNAC 
    TTTCTAGTCT NTTNTNTTTA CTTTGGTCGN NCACANTGAA AGGAGGCANC 
    CNTTTNNTTT

AT5G11420.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF642
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G25460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR