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13-3800-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19438738 [Map]; Strand: w
      • AT2G47360.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 13-3800-1 - 5-prime edge 
    GTGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT AAAACAGTTG TCAAATTCAA ATTATTTGAA 
    AGTTTTATGC AAAATTTTGT ATCAAACGTA TAGTCTATGC AGTTAAAAGA 
    TCTCTAGCAA AATTGACGAT TCCAATTTAT ATACAAATTC ATAATTTATT 
    TTAGTCTATG ACAAATTTGG TTGAAGTTCT TACACCAAAA CGAAGTTCAA 
    ATTCCAAGGC TTTAAAAATC GTTGTATGTC ATAATAAATG AAAAATCAGA 
    CTATTTGTAA TTAGAATGAT GTTCAGATCT TATAATGAAT GATTATCTAA 
    TAGATTAAAA GAGATTTGAC AAAGACAAGC TCTACATCAG ATTTGAGTAG 
    AATCATAAAG AATGTATTAC TACCAGAACT TAAAAAGAGA TTACTACTAC 
    TACAAATAAA GAGTCTAAAA CACAGCTTCC ACAAGTATGT GTCTCTTCTT 
    AGACCCAAAC CCAACAATGT GATTAAGATA AACTCTTCCT TCTTTAACAG 
    TAGCCGACGA GACTAACCGA TGAACCATAC CGCTGCTGAA CCAACCCGTC 
    ACAGAAGCCG TCCGCCACCC GTCTGAACTC TCTACCAGTT TCGAAGACGG 
    GCTACCTGAA AACACTCACA AATAGTCTAC AGTCATTGGT AGAACTTTAA 
    AAATCAAAAC TTTACTAAAG AATACCTACC ATTACCTGCA ACAACAATCT 
    TGGTTGGAGA CAAGAACTCA AGCCCATCAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8661948 [Map]; Strand: c
      • AT2G20070.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; BE...
        Distance: -90; Region: promoter
    Flanking Genome Sequence: 13-3800-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAAA 
    AGTGAGTAGG TTTACATGGT TTGATTTTCT ATATATAACA CGACACACAC 
    AAAGAAGAGA ACCAAGCACA ACACAATTTT TTTTATAACA ACTAAAATGG 
    CAAACAAGAT GGTCGCATCT CTTTATAAGA ATACNGTTCA TGATGATTGC 
    TCTTGTTCTC ATCCTTTTAA TTTCAGGTAT AATCTTTTAA ATAGCAAAAT 
    AAGTTTTTTT TTCATATATA AAACTTTTAT AGATGGTTTT CANCAAAAAA 
    AAAANTTTTC AACCNCCTAA GGANANTNGN AANANTTNNN NNGGTCCAAA 
    ACCAAAANCN ANGGGANTNT TTNANCCNNN GNGNCCGGGA NTTTGGGNAA 
    NTTNGGTNAA NCCAAATNGC ANGGGNCTTN NCCNNNANTN NGGGTTNCCN 
    GCGGGNGGNT TTNGTAANCC NGGAANCNCN TNTNNTNNCA AAAAAAANCN 
    CTNNGGNCCN GTNNNNGTNC CCCCNCCGGC NGGNNGGNNN TTTNTTNNNC 
    AANGGCCNTN ANTTTTCNNN ANNNNAAAAC TTCAAAANTN GAANNGGGNT 
    GGNCCCAACC NTTTGGGNTT TNTTTNTTGG GGGGANAANN AANTTNGGCT 
    NTTAANGNTT TTTTTTNAAN GGNGGCCTNN NTTNAAACCN NCTTNNNNGG 
    GTTTNGGNNC TTCCCNAAAA AAAANAANNN NNA

AT2G20070.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: low-molecular-weight cysteine-rich 81 (TAIR:AT2G25295.1); Has 10 Blast hits to 10 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47360.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02570.1); Has 58 Blast hits to 55 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR