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13-3811-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 92786 [Map]; Strand: w
      • AT4G00225.1 - [+] show detail - pseudogene, similar to sucrose transporter SUC1, blastp match of 53% identity...
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 13-3811-1 - 5-prime edge 
    CTTGAACATG ATCTTAGCGA TGTCTAAGGA CTAAGCTACA TAAACCAATG 
    AGTAAAATAC ATATGGATTG GACAATAATC ACCAATCAAA ACCCCAACGT 
    CGATTGCATA GCCGATAAGT AGTACCACAA TGGTGAGAGG AGGATAGTGC 
    CAGCGGCTAT GAAGGGTCGA CGTAAACCAA ACCTTGATGA GACACTGTAA 
    AACACGACTA TTGGTTGAAC AATCAGTTCC AATCGAGGCT CACAAAGTCA 
    AAGCATGCTT GTAAGATATT TGGAGTAATT GAAGGTACGG TGTAATCAGA 
    GCGTTTCTTG AATTGCCGAA ATGAAGTTTA GCCCTATGGC TATAGAAGCA 
    ATAAGCCATT TTTATATTCA TAACTTTAGA GGTATTAATA AGAAACATAT 
    ATAATTTTTT TATATAAATG TATTGACAAA AAATCAAGTA AAAATAAGCA 
    AGATGCAAAA CATAAGCAAC ATTTCTAATT AATATTATAT AATTTTTTAT 
    AATGATTTTA CACATGAAAA AATCTCTAAT TAATAGATAT GACACATGTG 
    CGATCATGTG AGTTATCAAT TTTGAATAGT TTTTTAATAC TAAATTGACA 
    TATTGTTTGA TCAGAAAATG TCATTTTTTG AAACTAAGTG AATGAATAAA 
    GGGTTGAGCT AAGCAATATA TAATTGTTGA TGATGAAATA ATAACATGAA 
    TNCAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 92670 [Map]; Strand: w
      • AT4G00225.1 - [+] show detail - pseudogene, similar to sucrose transporter SUC1, blastp match of 53% identity...
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 13-3811-1 - 3-prime edge 
    TGTTCAAGGT CCGTGTAGGG CCTTCTAGTT GATGTAGAGG CGGGAAATGC 
    TAAGAGAACA CAAGTTGAAA ACCAGCTTTT ATAAAAATGG TGAAAAAAAA 
    GACAAAATTG GCTCAAATTC TCTAGTAAAT TAGGAAGATT GTTAAATCAA 
    ATGCATGCTT CGAAGATGTT GTTAAAATAG TGTGGACTAC AAAGCAAACC 
    AGAGTATCAA ACTCAATTGA GTCGGGTTTA AGTAATATTT TGGGCTGCTT 
    GATATAAGAA AAAAAAACTT TATTGAACCC ATTTAAGGCC CAATATAAGT 
    GATAGGGAAA ATGANAAATG ANACTCATTG GTTCGTGTCT CGCGCCANAA 
    TCAAGCCTCC TTCACGCTCA ANATTCCACC CAAGTTGTGG ANAACCGGTG 
    TACTCTAGGC TGATTAAAAC AACATATTCG ATGGTCCAAG ANACCAAAGC 
    AACTTCAACA TATTGGCCTA TAANATACTC CATTTAATCA ATGTAAATCA 
    TATAGTTCTT ATATTAACAT TCTANACAAC AATTTAAATA CNAATT

AT4G00225.1

Model type
Pseudogene
Computational Description
pseudogene, similar to sucrose transporter SUC1, blastp match of 53% identity and 2.0e-09 P-value to GP|28371870|gb|AAO38059.1||AY190281 sucrose transporter SUC1 {Brassica napus}
Link
InterPro Scan - TAIR