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13-3838-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 148766 [Map]; Strand: w
      • AT4G00340.1 - [+] show detail - receptor-like protein kinase 4
        Distance: -48; Region: promoter
    Flanking Genome Sequence: 13-3838-1 - 5-prime edge 
    CCGGTGTTGA TGAATGAGGG TTAATATAGT AACTTTGGCG TTAGGAACTA 
    TAGTTCCAAA ACCTTTTTCT GAATGAATTT ACTTTTTGGA GGTATGAAGT 
    CACAGCTTTT ACAGATTTTA TCTTGCAAAA ATTCTCTCCA CATTTCAAAC 
    GTCTAATAGT TAAAGAGAGC TTTTGTTCTT TCTTTCCCAT GTCTATCAGT 
    ATCACCACCG AGAAAAAAAT ATCATCAACA CCACCAACCA AACATTAACC 
    CACCCGAGAG TACCCAATGC CATGTACTAC TTATCTTCCT CTTCTTCTTC 
    TCCTCTTCCT TCTTCCACTA CCATCTGTAC AAAGCAAAGT TATCATCAAA 
    GGAAACCAAA CCATTCTGAG TTTCAAAGCT ATTTTCCGGC TTGGTTTCTT 
    CAGCACCACC AATGGTTCCT CCAATTGGTA CTTGGGTATC TCTTACGCTT 
    CTATGCCAAC TCCCACCCAC GTTTGGGTCG CCAATCGAAT CCGACCCGTT 
    TCGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 148650 [Map]; Strand: w
      • AT4G00340.1 - [+] show detail - receptor-like protein kinase 4
        Distance: -164; Region: promoter
    Flanking Genome Sequence: 13-3838-1 - 3-prime edge 
    AACACCGGCA GGATAGGAAC TAGAAGAAAG AGAAGGGCAG AATAGGAATT 
    GAGAAGAGGG AGGTGGCAGT GGCAGACATA AGTGGCTAGA AGTCAAAGCC 
    ATGACATCTT TTTTCTCTTC TTCTTAAATG ATTCCTAACC TTTTTCTTAA 
    TTATTTCTAA TTAATTACTT TATGCAGCAG ACAAAAGGTG TTAATCAAAG 
    AATCATTTTC TTTTTAATAT CTTACACACG ACAAGACTAG TCGCATGTGG 
    ATCAATTTAC TATTTGGAAT ATTCAGTTTC TCTTTAGACT ATGGAATTAT 
    ACTATATCCA TATCTAATAG AATCTCTCTT TCTTTAACCA AACAAACAAA 
    CAAAATCATG CTTATTATGA TTCCCAGATC AGGGCATTAA CCAATATTGC 
    TAAGATAGAA TCATGGATCA AGACAAGAGT GGACATGATT TTGAAGATGC 
    AAACAATCAA AATACTGAAA TGGTGGTCCT TTCTTCTCTA TCACACCCCG 
    GAGATCACAA ACGAACGAAC AAGAAGCTAG GTAATATTTA CAATTGTTAT 
    GTATATCTAT ATGATCGCAC AAGGGCAAAA CGAACATAAC CAATACGACA 
    AAACTAAGTG GAAATGTGGA GACCCAACAC TTAAAGTGTG TGAGGAAGAA 
    ACAAAATAGA TGTATGCTAA TTATGTAGTA GACTAACCAA ACAAAGCGCC 
    ACACCTTCAA ACTTTCAAGC CAGGGGATAG TAN

AT4G00340.1

Model type
Protein coding
Short Description
receptor-like protein kinase 4
Curator Summary
Encodes a receptor-like protein kinase that is expressed in roots.
Computational Description
receptor-like protein kinase 4 (RLK4); FUNCTIONS IN: sugar binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 118915 Blast hits to 117390 proteins in 4385 species: Archae - 97; Bacteria - 13085; Metazoa - 43904; Fungi - 9417; Plants - 35014; Viruses - 433; Other Eukaryotes - 16965 (source: NCBI BLink).
Link
InterPro Scan - TAIR