1. Home
  2. Mutant Lines
  3. 13-3838-1

13-3838-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 148766 [Map]; Strand: w
      • AT4G00340.1 - [+] show detail - receptor-like protein kinase 4
        Distance: -48; Region: promoter
    Flanking Genome Sequence: 13-3838-1 - 5-prime edge
    CCGGTGTTGA TGAATGAGGG TTAATATAGT AACTTTGGCG TTAGGAACTA 
    TAGTTCCAAA ACCTTTTTCT GAATGAATTT ACTTTTTGGA GGTATGAAGT
    CACAGCTTTT ACAGATTTTA TCTTGCAAAA ATTCTCTCCA CATTTCAAAC
    GTCTAATAGT TAAAGAGAGC TTTTGTTCTT TCTTTCCCAT GTCTATCAGT
    ATCACCACCG AGAAAAAAAT ATCATCAACA CCACCAACCA AACATTAACC
    CACCCGAGAG TACCCAATGC CATGTACTAC TTATCTTCCT CTTCTTCTTC
    TCCTCTTCCT TCTTCCACTA CCATCTGTAC AAAGCAAAGT TATCATCAAA
    GGAAACCAAA CCATTCTGAG TTTCAAAGCT ATTTTCCGGC TTGGTTTCTT
    CAGCACCACC AATGGTTCCT CCAATTGGTA CTTGGGTATC TCTTACGCTT
    CTATGCCAAC TCCCACCCAC GTTTGGGTCG CCAATCGAAT CCGACCCGTT
    TCGGATC
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 148650 [Map]; Strand: w
      • AT4G00340.1 - [+] show detail - receptor-like protein kinase 4
        Distance: -164; Region: promoter
    Flanking Genome Sequence: 13-3838-1 - 3-prime edge
    AACACCGGCA GGATAGGAAC TAGAAGAAAG AGAAGGGCAG AATAGGAATT 
    GAGAAGAGGG AGGTGGCAGT GGCAGACATA AGTGGCTAGA AGTCAAAGCC
    ATGACATCTT TTTTCTCTTC TTCTTAAATG ATTCCTAACC TTTTTCTTAA
    TTATTTCTAA TTAATTACTT TATGCAGCAG ACAAAAGGTG TTAATCAAAG
    AATCATTTTC TTTTTAATAT CTTACACACG ACAAGACTAG TCGCATGTGG
    ATCAATTTAC TATTTGGAAT ATTCAGTTTC TCTTTAGACT ATGGAATTAT
    ACTATATCCA TATCTAATAG AATCTCTCTT TCTTTAACCA AACAAACAAA
    CAAAATCATG CTTATTATGA TTCCCAGATC AGGGCATTAA CCAATATTGC
    TAAGATAGAA TCATGGATCA AGACAAGAGT GGACATGATT TTGAAGATGC
    AAACAATCAA AATACTGAAA TGGTGGTCCT TTCTTCTCTA TCACACCCCG
    GAGATCACAA ACGAACGAAC AAGAAGCTAG GTAATATTTA CAATTGTTAT
    GTATATCTAT ATGATCGCAC AAGGGCAAAA CGAACATAAC CAATACGACA
    AAACTAAGTG GAAATGTGGA GACCCAACAC TTAAAGTGTG TGAGGAAGAA
    ACAAAATAGA TGTATGCTAA TTATGTAGTA GACTAACCAA ACAAAGCGCC
    ACACCTTCAA ACTTTCAAGC CAGGGGATAG TAN

AT4G00340.1

Model type
Protein coding
Short Description
receptor-like protein kinase 4
Curator Summary
Encodes a receptor-like protein kinase that is expressed in roots.
Computational Description
receptor-like protein kinase 4 (RLK4); FUNCTIONS IN: sugar binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 118915 Blast hits to 117390 proteins in 4385 species: Archae - 97; Bacteria - 13085; Metazoa - 43904; Fungi - 9417; Plants - 35014; Viruses - 433; Other Eukaryotes - 16965 (source: NCBI BLink).
Link
InterPro Scan - TAIR