Home
Mutant Lines
13-3849-1

13-3849-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 28619763 [Map]; Strand: c
- AT1G76280.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: intron8 (CDS)
- AT1G76280.3 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: intron9 (CDS)
- AT1G76280.2 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: intron9 (CDS)

CTTGTGACTA TGTTGCCACT CTAATCATAG GAGAGTCTTG GAACAAAGGG 
TTAATGATCT GTTCTATTAG TTCGTACTCG AAATATTCGT ACAAAAATAA 
TCGGCATTCT AAGTGGTTGT CTTGTTAGTA TGTGTCCATT TTTAGTACAT 
AATCCTTGAA CCTAAACAAC TTTATTCTGT TTATTTACGG GTGTAACCTG 
TGAGATTCAG CTTCTTACTA TTGCTTTGTA GGATCAACCA GAGCGTGCTG 
TCCGAGTTTT GGCTAGAATG AAAGAGCTAA AACTGCGTCC AGATATGAGG 
ACCTATGAAC TGCTCTTTTC CTTATTTGGT AATGTAAATG CACCATATGA 
AGAGGGCAAC ATGTTGTCCC AAGTAGACTG TTGTAAAAGG ATTAACGCTA 
TAGAAATGGA CATGATGAGA AATGGTTTTC AGCACAGTCC TATCTCAAGG 
CTGAATGTGG TTAGTTTCTG CTCCATATAG ATAGGTCTTG ACCTGTTTTA 
AGCAGATTAA TCAAATGTAA TATTAATCTG GAAAATCCCT TTTAAGGCGA 
TACTATCAAT CTTTACTTCT TCATTGNGTA TGTTTGTGTT ATATATCAGA 
ACAATGGACT TATCGTTTAC ACTTTCCTTT TTCTTTCCCA GCTTAAAGCT 
CTCGGAGCTG AAGGTATGGT GAATGAAATG ATCCGACACC TGCAAAAGGC 
TGANAACCTC AN

3 prime edge [+] show sequence

Chromosome: 1; Position: 28619879 [Map]; Strand: c
- AT1G76280.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: intron8 (CDS)
- AT1G76280.3 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: intron9 (CDS)
- AT1G76280.2 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: intron9 (CDS)

GTCACAAGTA CGGTCTTTTG AAATTTCTAT GGCATCTAGG ATCAAACTAA 
TGAACTTGAG GGTTCGGGAA ATATACTTGT AACAGAATAC ACAAACAGCG 
AAAGGTAAAC GAGGTAGCTA CGGTATATAG CNTTTCAATA TGTAGAATCA 
AACTAACTCA CCAAGGAGTC ATATGCAGCA AGAAGGTTAT TGAAAGGATA 
TGAGTATGAG CATTCAGATA TTTGATCCAG CAGATGTTCA GCTAAATCAA 
CTTGAAGGGC TTTACTGCAA TAGGCTGCAA CCGTAGCTAG AGTTGAATCA 
TATGGTTTCA GATTCTGCTG CTGCATTACT TTCAACTGCG TAGAGATATG 
ATATATAAAG AGAAATCGTT ATAAAAAAAA CCGAAACTAC AGAAAGAAAG 
AAATGTTGAA AGAGATGGCT TGTACATTAT ACAAACTCCT ACCAGTGTCA 
TGCCATATTC ATATCCTTCT GGAAATGCAA CAGCTCTAAT GAAACCATCA 
TATGTGTGAC TTGATGGTAG CAACCCAAGA TTTTGCATCT TTTAGTGCAG 
ATAAGAAGAA AGAAAGAAAT GAGGTTTCAC CAAATACCAC AAAGCAGGAC 
CCGAACCAGT TAAAGGACAA AAGGGAAGCG GACTATATAA CAGACTTTTA 
TAGCCCAACG AGGACGTAAA GAGCGTATCA ATGATCATGA AAGCT

AT1G76280.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: genomes uncoupled 1 (TAIR:AT2G31400.1); Has 14296 Blast hits to 5357 proteins in 164 species: Archae - 2; Bacteria - 0; Metazoa - 31; Fungi - 37; Plants - 13843; Viruses - 0; Other Eukaryotes - 383 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G76280.2

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G18940.1); Has 12686 Blast hits to 5224 proteins in 153 species: Archae - 1; Bacteria - 0; Metazoa - 27; Fungi - 31; Plants - 12255; Viruses - 0; Other Eukaryotes - 372 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G76280.3

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: genomes uncoupled 1 (TAIR:AT2G31400.1).
Link: InterPro Scan - TAIR