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Mutant Lines
13-3865-1

13-3865-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 30041953 [Map]; Strand: c
  - AT1G79850.1 - [+] show detail - ribosomal protein S17
    Distance: -1; Region: promoter
Flanking Genome Sequence: 13-3865-1 - 5-prime edge
```
GGGAAAAACN AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCTCT TCATTTCATC GATTCGATTC CAAATCGGAA 
GGATGATAAC GACGTCCCTA ACCTCATCTC TGCAAGCTCT CAAGCT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 30042009 [Map]; Strand: c
- AT1G79850.1 - [+] show detail - ribosomal protein S17
  Distance: -57; Region: promoter

ATTTAGGTGA GTACTACTAC TATTTAGAAG GGATGTATAC AGTATACAGA 
TGGTAAATGG GTTTTACAAT ACAATGGGCC TAATCTTAAA AGCCCACATT 
TTTATAAAAA GGAATTTACA AAAGCCCTTT TGTAAAGTTT TTGAATCCTA 
AAAATAATTA AATAATCAAT AAATCTGTCT TCGCTCTTTT TTGCGCCTAA 
TTTTCCACAC AAATATCAAT GCCGTGCCGT TGGACTCTTG ACACCGCCTA 
GGGTTTCGAG GTATGAGGTC TTCTTGGTCG TGACGACGCT TAGCTTCTCC 
TTTATCAACG GATCATCCGG TAGATCCTTC TTCGACTCCA ATTCGGCGTT 
CGCGGCCTGA TCGAAGTCCC ATCCCATGAA ATCCGACAGC GTCATGCTCC 
CAACCAGCGT CTCTTCCTCT GCTTCCATCG GCGTGTTCCT CTTGTTCCCC 
GCTCGATCTG CCTCTAAAAC GTCATCGATT CTGGAAAGTA CCGTGTAGGC 
CAAGCT

AT1G79850.1

Model type: Protein coding
Short Description: ribosomal protein S17
Curator Summary: nuclear-encoded 30S chloroplast ribosomal protein S17
Computational Description: ribosomal protein S17 (RPS17); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, plastid small ribosomal subunit, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, conserved site (InterPro:IPR019979), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G49400.1); Has 7449 Blast hits to 7449 proteins in 2625 species: Archae - 136; Bacteria - 5329; Metazoa - 5; Fungi - 63; Plants - 102; Viruses - 0; Other Eukaryotes - 1814 (source: NCBI BLink).
Link: InterPro Scan - TAIR