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13-3913-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30188121 [Map]; Strand: w
      • AT1G80290.1 - [+] show detail - Nucleotide-diphospho-sugar transferases superfamily protein
        Distance: -200; Region: promoter
      • AT1G80290.2 - [+] show detail - Nucleotide-diphospho-sugar transferases superfamily protein
        Distance: -243; Region: promoter
    Flanking Genome Sequence: 13-3913-1 - 3-prime edge
    AAAAANANAA TTANNNNNAN TTTGGAGCAC TGGAGTGTTT TTNCGACCGT 
    TACCGACCGT TTTCATCCCT GGAGGCTACT ACTATATACG TAGTGTCTAG
    TTTAGTTATA AGGCCAGCAC AGCACAACAC ACTTATACCG ACANAACATG
    TGTGTCATTT AACTCGATGA CAAAGCACAG AAACAAGTTG GTCGTTTATT
    TTAAGCAAAG TCATAGGTAC ACTGTCTAAT TAATAAACTA ATCTTTGAGA
    TTTCAAGCAC AAAACAAATA TTCAATATCA ACAAGTCATG ACAGAATCCT
    CTGCCTCGGA TTCCATTGTA GATAGAAACG GAGACAANAA ACAAACGAAT
    GAATATNGAG ATCTANTTAA TAACCTTTTG CCCCAAGGAA AAAAAGATNT
    AAAATAAAAA CNTAGATAGG TAAAAGAGGG AGTGAGAGAT GCATGAAAGT
    GAGNNAATGG TGGGGAATNN AAGAGGGGCT TGTNCATNTG GGCACNTCTA
    NATGCCGCCG CACGAANGGT CCNATGNNAN CNGCNTAANC CANTGAAANN
    NNNNANAGNG AANNTNGCGA CCCNATNCTC GAGANNNNTT NCTNTTNGTC
    ANNANGTANN NTTGNCTTNN ATNTATTGNN CCNTCAGCTN CTCTCTANNT
    GANCAATCAN TNAGCGCGNT GNTANNNNAN NCNTTNANCN NNGGTTTNAN
    GGNTCAAGAA AAAGNTNAGG GNACNNTATC CATNTAACNT TTNTNGAATN
    GCNCGNGCCN TAGNANGTNN GTNNTTTNNN NANANNAANN GNAAANTNAG
    TNGANTNGTN

AT1G80290.1

Model type
Protein coding
Short Description
Nucleotide-diphospho-sugar transferases superfamily protein
Curator Summary
a member of the Glycosyltransferase Family 64 (according to CAZy Database)
Computational Description
Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EXTL2, alpha-1,4-N-acetylhexosaminyltransferase (InterPro:IPR015338); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G55830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80290.2

Model type
Protein coding
Short Description
Nucleotide-diphospho-sugar transferases superfamily protein
Curator Summary
a member of the Glycosyltransferase Family 64 (according to CAZy Database)
Computational Description
Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EXTL2, alpha-1,4-N-acetylhexosaminyltransferase (InterPro:IPR015338); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G55830.1); Has 640 Blast hits to 640 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 485; Fungi - 8; Plants - 102; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Link
InterPro Scan - TAIR