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13-3935-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 240385 [Map]; Strand: w
      • AT4G00550.1 - [+] show detail - digalactosyl diacylglycerol deficient 2
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-3935-1 - 3-prime edge 
    CCAACCAGTC TGTTAATTTT GTATAAACAA TGAAACGAAG AAGATCTTCC 
    GAGAATATTC TCTCCTTCTC ACGCATACCC TAGAATATTG TTTCGTCTCT 
    CTTCCTTCTA CGTTTGCTTA TTTGCCCCAA CTCGACGCGA ATCATCAGCN 
    TTTTATAAAT TCTGTCAACT CAAAGATTGT TTCTGAATTG GAATCTTACA 
    GGTATGGCTT CAATTTTTTT TTTTTTTTTT TTTTNGGGGG AAAAAAAAAA 
    NCNNNGNANN GGGGNAAAAA ANNNGNGNAN TTTNNAAAAA AAAAAAAAAN 
    TNNGGGGNAA NGGNNTNNNN TTNGGGGNNN NNGNNANNNN NAAAAAAANC 
    CNNNTTNNAA AAAANTTNGG GGGNNNNTTT TTNNGGGGAA AANTTGGNNG 
    GGGGNNCCNG GG

AT4G00550.1

Model type
Protein coding
Short Description
digalactosyl diacylglycerol deficient 2
Curator Summary
encodes a UDP-galactose-dependent digalactosyldiacylglycerol(DGDG) synthase. Located in chloroplast outer membrane.
Computational Description
digalactosyl diacylglycerol deficient 2 (DGD2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR